abinitio.OptionKeys.gen.hh File Reference

basic::options::OptionKeys collection More...

#include <basic/options/keys/OptionKeys.hh>

Namespaces
	basic
	Tags used to tag messeges sent by MPI functions used to decide whether a slave is requesting a new job id or flagging as job as being a bad input.
	basic::options
	basic::options::OptionKeys
	basic::options::OptionKeys::abinitio
	basic::options::OptionKeys::abinitio::star

Variables
BooleanOptionKey const	basic::options::OptionKeys::abinitio::abinitio
BooleanOptionKey const	basic::options::OptionKeys::abinitio::membrane
BooleanOptionKey const	basic::options::OptionKeys::abinitio::use_loophash_filter
RealOptionKey const	basic::options::OptionKeys::abinitio::loophash_filter_acceptance_rate
FileOptionKey const	basic::options::OptionKeys::abinitio::kill_hairpins
RealOptionKey const	basic::options::OptionKeys::abinitio::kill_hairpins_frequency
BooleanOptionKey const	basic::options::OptionKeys::abinitio::smooth_cycles_only
BooleanOptionKey const	basic::options::OptionKeys::abinitio::relax
BooleanOptionKey const	basic::options::OptionKeys::abinitio::final_clean_relax
BooleanOptionKey const	basic::options::OptionKeys::abinitio::fastrelax
BooleanOptionKey const	basic::options::OptionKeys::abinitio::multifastrelax
BooleanOptionKey const	basic::options::OptionKeys::abinitio::debug
BooleanOptionKey const	basic::options::OptionKeys::abinitio::clear_pose_cache
BooleanOptionKey const	basic::options::OptionKeys::abinitio::explicit_pdb_debug
BooleanOptionKey const	basic::options::OptionKeys::abinitio::use_filters
RealOptionKey const	basic::options::OptionKeys::abinitio::increase_cycles
IntegerOptionKey const	basic::options::OptionKeys::abinitio::number_3mer_frags
IntegerOptionKey const	basic::options::OptionKeys::abinitio::number_9mer_frags
RealOptionKey const	basic::options::OptionKeys::abinitio::temperature
RealOptionKey const	basic::options::OptionKeys::abinitio::rg_reweight
RealOptionKey const	basic::options::OptionKeys::abinitio::rsd_wt_helix
RealOptionKey const	basic::options::OptionKeys::abinitio::rsd_wt_strand
RealOptionKey const	basic::options::OptionKeys::abinitio::rsd_wt_loop
BooleanOptionKey const	basic::options::OptionKeys::abinitio::skip_convergence_check
FileVectorOptionKey const	basic::options::OptionKeys::abinitio::stage1_patch
FileVectorOptionKey const	basic::options::OptionKeys::abinitio::stage2_patch
FileVectorOptionKey const	basic::options::OptionKeys::abinitio::stage3a_patch
FileVectorOptionKey const	basic::options::OptionKeys::abinitio::stage3b_patch
FileVectorOptionKey const	basic::options::OptionKeys::abinitio::stage4_patch
FileVectorOptionKey const	basic::options::OptionKeys::abinitio::stage5_patch
BooleanOptionKey const	basic::options::OptionKeys::abinitio::steal_3mers
BooleanOptionKey const	basic::options::OptionKeys::abinitio::steal_9mers
BooleanOptionKey const	basic::options::OptionKeys::abinitio::no_write_failures
BooleanOptionKey const	basic::options::OptionKeys::abinitio::relax_failures
BooleanOptionKey const	basic::options::OptionKeys::abinitio::relax_with_jumps
BooleanOptionKey const	basic::options::OptionKeys::abinitio::process_store
IntegerVectorOptionKey const	basic::options::OptionKeys::abinitio::fix_residues_to_native
BooleanOptionKey const	basic::options::OptionKeys::abinitio::return_full_atom
BooleanOptionKey const	basic::options::OptionKeys::abinitio::detect_disulfide_before_relax
BooleanOptionKey const	basic::options::OptionKeys::abinitio::close_loops
BooleanOptionKey const	basic::options::OptionKeys::abinitio::bGDT
BooleanOptionKey const	basic::options::OptionKeys::abinitio::dump_frags
BooleanOptionKey const	basic::options::OptionKeys::abinitio::jdist_rerun
RealOptionKey const	basic::options::OptionKeys::abinitio::perturb
BooleanOptionKey const	basic::options::OptionKeys::abinitio::rerun
IntegerVectorOptionKey const	basic::options::OptionKeys::abinitio::rmsd_residues
BooleanOptionKey const	basic::options::OptionKeys::abinitio::start_native
BooleanOptionKey const	basic::options::OptionKeys::abinitio::cyclic_peptide
BooleanOptionKey const	basic::options::OptionKeys::abinitio::debug_structures
FileOptionKey const	basic::options::OptionKeys::abinitio::log_frags
BooleanOptionKey const	basic::options::OptionKeys::abinitio::only_stage1
RealOptionKey const	basic::options::OptionKeys::abinitio::end_bias
BooleanOptionKey const	basic::options::OptionKeys::abinitio::apply_end_bias
IntegerOptionKey const	basic::options::OptionKeys::abinitio::symmetry_residue
RealOptionKey const	basic::options::OptionKeys::abinitio::vdw_weight_stage1
BooleanOptionKey const	basic::options::OptionKeys::abinitio::override_vdw_all_stages
IntegerVectorOptionKey const	basic::options::OptionKeys::abinitio::recover_low_in_stages
IntegerVectorOptionKey const	basic::options::OptionKeys::abinitio::skip_stages
BooleanOptionKey const	basic::options::OptionKeys::abinitio::close_chbrk
BooleanOptionKey const	basic::options::OptionKeys::abinitio::include_stage5
BooleanOptionKey const	basic::options::OptionKeys::abinitio::close_loops_by_idealizing
BooleanOptionKey const	basic::options::OptionKeys::abinitio::optimize_cutpoints_using_kic
IntegerOptionKey const	basic::options::OptionKeys::abinitio::optimize_cutpoints_margin
BooleanOptionKey const	basic::options::OptionKeys::abinitio::star::star
RealOptionKey const	basic::options::OptionKeys::abinitio::star::initial_dist_cutoff
IntegerOptionKey const	basic::options::OptionKeys::abinitio::star::min_unaligned_len

Detailed Description

basic::options::OptionKeys collection

Author

Stuart G. Mentzer (Stuar.nosp@m.t_Me.nosp@m.ntzer.nosp@m.@obj.nosp@m.exx.c.nosp@m.om)

James M. Thompson (tex@u.nosp@m..was.nosp@m.hingt.nosp@m.on.e.nosp@m.du)