aa() const | protocols::forge::build::SegmentInsert | inline |
aa_ | protocols::forge::build::SegmentInsert | private |
add_dependency_to(BuildInstructionCAP i) | protocols::forge::build::BuildInstruction | virtual |
attach_to(Pose &pose) | protocols::forge::build::BuildInstruction | |
BuildInstruction() | protocols::forge::build::BuildInstruction | |
BuildInstruction(Interval const &i, ResidueTypeSetCAP rts=core::chemical::ChemicalManager::get_instance() ->residue_type_set(core::chemical::FA_STANDARD)) | protocols::forge::build::BuildInstruction | |
BuildInstruction(BuildInstruction const &rval) | protocols::forge::build::BuildInstruction | |
BuildInstructionCAPs typedef | protocols::forge::build::BuildInstruction | |
clear_dependencies() | protocols::forge::build::BuildInstruction | inline |
clone() const override | protocols::forge::build::SegmentInsert | virtual |
compatible_with(BuildInstruction const &rval) const | protocols::forge::build::BuildInstruction | virtual |
creates_undefined_backbone() const override | protocols::forge::build::SegmentInsert | inlinevirtual |
defined_positions() const override | protocols::forge::build::SegmentInsert | virtual |
dependencies() const | protocols::forge::build::BuildInstruction | inline |
dependencies_satisfied() const override | protocols::forge::build::SegmentInsert | inlineprotectedvirtual |
dependent_on(BuildInstructionCAP i) const | protocols::forge::build::BuildInstruction | virtual |
detach_after_modify() const | protocols::forge::build::BuildInstruction | inline |
detach_after_modify(bool const flag) | protocols::forge::build::BuildInstruction | inline |
detach_from() | protocols::forge::build::BuildInstruction | |
flanking_left_aa() const | protocols::forge::build::SegmentInsert | |
flanking_left_nres() const | protocols::forge::build::SegmentInsert | |
flanking_left_ss() const | protocols::forge::build::SegmentInsert | |
flanking_right_aa() const | protocols::forge::build::SegmentInsert | |
flanking_right_nres() const | protocols::forge::build::SegmentInsert | |
flanking_right_ss() const | protocols::forge::build::SegmentInsert | |
has_dependencies() const | protocols::forge::build::BuildInstruction | inline |
init() | protocols::forge::build::SegmentInsert | private |
insert_connection_scheme() const | protocols::forge::build::SegmentInsert | inline |
insert_connection_scheme_ | protocols::forge::build::SegmentInsert | private |
insert_pose() const | protocols::forge::build::SegmentInsert | |
insert_pose_ | protocols::forge::build::SegmentInsert | private |
insert_pose_torsion_override_movemap() const | protocols::forge::build::SegmentInsert | inline |
insert_pose_torsion_override_movemap(MoveMap const &mm) | protocols::forge::build::SegmentInsert | |
insert_pose_torsion_override_movemap_ | protocols::forge::build::SegmentInsert | private |
insertion_char() | protocols::forge::build::SegmentInsert | inlinestatic |
insertion_end_residue() const | protocols::forge::build::SegmentInsert | |
insertion_point_absolute_index() const | protocols::forge::build::SegmentInsert | |
insertion_start_residue() const | protocols::forge::build::SegmentInsert | |
interval() const override | protocols::forge::build::SegmentInsert | virtual |
interval_ | protocols::forge::build::SegmentInsert | private |
keep_known_bb_torsions_at_junctions() const | protocols::forge::build::SegmentInsert | inline |
keep_known_bb_torsions_at_junctions_ | protocols::forge::build::SegmentInsert | private |
length_obs_link() const | protocols::forge::build::BuildInstruction | inlineprotected |
LengthEvent typedef | protocols::forge::build::SegmentInsert | |
Link typedef | protocols::forge::build::BuildInstruction | |
modify(Pose &pose) | protocols::forge::build::BuildInstruction | |
modify_impl(Pose &pose) override | protocols::forge::build::SegmentInsert | protectedvirtual |
modify_was_successful() const | protocols::forge::build::BuildInstruction | |
movemap() const override | protocols::forge::build::SegmentInsert | virtual |
MoveMap typedef | protocols::forge::build::SegmentInsert | |
n_dependencies() const | protocols::forge::build::BuildInstruction | inline |
new_positions() const override | protocols::forge::build::SegmentInsert | virtual |
on_length_change(LengthEvent const &event) | protocols::forge::build::BuildInstruction | |
on_residue_append(LengthEvent const &event) override | protocols::forge::build::SegmentInsert | virtual |
on_residue_delete(LengthEvent const &event) override | protocols::forge::build::SegmentInsert | virtual |
on_residue_prepend(LengthEvent const &event) override | protocols::forge::build::SegmentInsert | virtual |
operator=(SegmentInsert const &rval) | protocols::forge::build::SegmentInsert | |
protocols::forge::build::BuildInstruction::operator=(BuildInstruction const &rval) | protocols::forge::build::BuildInstruction | |
original_deleted_positions() const override | protocols::forge::build::SegmentInsert | virtual |
original_fixed_positions() const override | protocols::forge::build::SegmentInsert | virtual |
original_interval() const | protocols::forge::build::BuildInstruction | inline |
original_interval_valid() const override | protocols::forge::build::SegmentInsert | inlinevirtual |
original_kept_positions() const override | protocols::forge::build::SegmentInsert | virtual |
original_mutable_positions() const override | protocols::forge::build::SegmentInsert | virtual |
performing_pure_insertion() const | protocols::forge::build::SegmentInsert | inline |
Pose typedef | protocols::forge::build::SegmentInsert | |
Positions typedef | protocols::forge::build::SegmentInsert | |
preexisting_positions() const override | protocols::forge::build::SegmentInsert | virtual |
ready() const | protocols::forge::build::BuildInstruction | |
Real typedef | protocols::forge::build::SegmentInsert | |
reset_accounting() | protocols::forge::build::BuildInstruction | |
reset_accounting_impl() override | protocols::forge::build::SegmentInsert | protectedvirtual |
residue_type_set() const | protocols::forge::build::BuildInstruction | inline |
ResidueTypeSet typedef | protocols::forge::build::BuildInstruction | |
ResidueTypeSetCAP typedef | protocols::forge::build::SegmentInsert | |
ResidueTypeSetCOP typedef | protocols::forge::build::BuildInstruction | |
SegmentInsert() | protocols::forge::build::SegmentInsert | |
SegmentInsert(Interval const &i, String const &ss, Pose const &insert, bool const keep_known_bb_torsions_at_junctions=false, SegmentInsertConnectionScheme::Enum connection_scheme=protocols::forge::build::SegmentInsertConnectionScheme::RANDOM_SIDE) | protocols::forge::build::SegmentInsert | |
SegmentInsert(Interval const &i, String const &ss, String const &aa, Pose const &insert, bool const keep_known_bb_torsions_at_junctions=false, SegmentInsertConnectionScheme::Enum connection_scheme=protocols::forge::build::SegmentInsertConnectionScheme::RANDOM_SIDE) | protocols::forge::build::SegmentInsert | |
SegmentInsert(SegmentInsert const &rval) | protocols::forge::build::SegmentInsert | |
Size typedef | protocols::forge::build::SegmentInsert | |
ss() const | protocols::forge::build::SegmentInsert | inline |
ss_ | protocols::forge::build::SegmentInsert | private |
state() const | protocols::forge::build::BuildInstruction | inline |
state(BuildInstructionState::Enum const s) | protocols::forge::build::BuildInstruction | inlineprotected |
String typedef | protocols::forge::build::SegmentInsert | |
Super typedef | protocols::forge::build::SegmentInsert | private |
undefined_positions() const override | protocols::forge::build::SegmentInsert | virtual |
waiting_on_dependencies() const | protocols::forge::build::BuildInstruction | |
~BuildInstruction() override | protocols::forge::build::BuildInstruction | |
~SegmentInsert() override | protocols::forge::build::SegmentInsert | |