apply(pose::Pose &pose, std::string prefix="", std::string suffix="", bool override_existing_data=false) const override | core::simple_metrics::RealMetric | virtual |
cached_calculate(pose::Pose const &pose, bool use_cache, std::string prefix="", std::string suffix="", bool fail_on_missing_cache=true) const | core::simple_metrics::RealMetric | |
calculate(core::pose::Pose const &pose) const override | core::simple_metrics::metrics::RMSDMetric | virtual |
clone() const override | core::simple_metrics::metrics::RMSDMetric | virtual |
complex_type_generator_for_simple_metric(utility::tag::XMLSchemaDefinition &) | core::simple_metrics::SimpleMetric | static |
get_custom_type() const | core::simple_metrics::SimpleMetric | |
get_final_sm_type() const | core::simple_metrics::SimpleMetric | |
get_metric_names() const override | core::simple_metrics::RealMetric | virtual |
metric() const override | core::simple_metrics::metrics::RMSDMetric | virtual |
name() const override | core::simple_metrics::metrics::RMSDMetric | virtual |
name_mapping_ | core::simple_metrics::metrics::RMSDMetric | private |
name_static() | core::simple_metrics::metrics::RMSDMetric | static |
override_atom_names_ | core::simple_metrics::metrics::RMSDMetric | private |
parse_base_tag(utility::tag::TagCOP tag) | core::simple_metrics::SimpleMetric | virtual |
parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &data) override | core::simple_metrics::metrics::RMSDMetric | virtual |
provide_authorship_info_for_unpublished() const override | core::simple_metrics::metrics::RMSDMetric | virtual |
provide_citation_info() const override | core::simple_metrics::metrics::RMSDMetric | virtual |
provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd) | core::simple_metrics::metrics::RMSDMetric | static |
RealMetric() | core::simple_metrics::RealMetric | |
RealMetric(RealMetric const &other) | core::simple_metrics::RealMetric | |
ref_pose_ | core::simple_metrics::metrics::RMSDMetric | private |
residue_selector_ | core::simple_metrics::metrics::RMSDMetric | private |
residue_selector_ref_ | core::simple_metrics::metrics::RMSDMetric | private |
residue_selector_super_ | core::simple_metrics::metrics::RMSDMetric | private |
residue_selector_super_ref_ | core::simple_metrics::metrics::RMSDMetric | private |
rmsd_map_ | core::simple_metrics::metrics::RMSDMetric | private |
rmsd_type_ | core::simple_metrics::metrics::RMSDMetric | private |
RMSDMetric() | core::simple_metrics::metrics::RMSDMetric | |
RMSDMetric(core::pose::PoseCOP ref_pose) | core::simple_metrics::metrics::RMSDMetric | |
RMSDMetric(core::pose::PoseCOP ref_pose, core::select::residue_selector::ResidueSelectorCOP selector) | core::simple_metrics::metrics::RMSDMetric | |
RMSDMetric(RMSDMetric const &src) | core::simple_metrics::metrics::RMSDMetric | |
robust_ | core::simple_metrics::metrics::RMSDMetric | private |
set_comparison_pose(core::pose::PoseCOP pose) | core::simple_metrics::metrics::RMSDMetric | |
set_corresponding_atoms_robust(bool robust) | core::simple_metrics::metrics::RMSDMetric | |
set_custom_type(std::string const &custom_type) | core::simple_metrics::SimpleMetric | |
set_residue_mapping(std::map< core::Size, core::Size > const &rmsd_map) | core::simple_metrics::metrics::RMSDMetric | |
set_residue_selector(core::select::residue_selector::ResidueSelectorCOP residue_selector) | core::simple_metrics::metrics::RMSDMetric | |
set_residue_selector_reference(core::select::residue_selector::ResidueSelectorCOP residue_selector) | core::simple_metrics::metrics::RMSDMetric | |
set_residue_selector_super(core::select::residue_selector::ResidueSelectorCOP residue_selector) | core::simple_metrics::metrics::RMSDMetric | |
set_residue_selector_super_reference(core::select::residue_selector::ResidueSelectorCOP residue_selector) | core::simple_metrics::metrics::RMSDMetric | |
set_rmsd_type(scoring::rmsd_atoms rmsd_type) | core::simple_metrics::metrics::RMSDMetric | |
set_run_superimpose(bool super) | core::simple_metrics::metrics::RMSDMetric | |
setup_name_mapping() | core::simple_metrics::metrics::RMSDMetric | private |
simple_metric_is_unpublished() const override | core::simple_metrics::metrics::RMSDMetric | virtual |
simple_metric_provides_citation_info() const | core::simple_metrics::SimpleMetric | virtual |
simple_metric_type() const | core::simple_metrics::SimpleMetric | inline |
SimpleMetric(std::string const &simple_metric_type) | core::simple_metrics::SimpleMetric | |
SimpleMetric(SimpleMetric const &other) | core::simple_metrics::SimpleMetric | |
superimpose_ | core::simple_metrics::metrics::RMSDMetric | private |
~RealMetric() override | core::simple_metrics::RealMetric | |
~RMSDMetric() override | core::simple_metrics::metrics::RMSDMetric | |
~SimpleMetric() override | core::simple_metrics::SimpleMetric | |