core::pack::annealer::MultiCoolAnnealer Member List

This is the complete list of members for core::pack::annealer::MultiCoolAnnealer, including all inherited members.

bestenergy()	core::pack::annealer::SimAnnealerBase	protected
bestrotamer_at_seqpos()	core::pack::annealer::SimAnnealerBase	protected
bestrotamer_at_seqpos() const	core::pack::annealer::SimAnnealerBase	protected
calc_freq_temp	core::pack::annealer::SimAnnealerBase	protectedstatic
calc_rot_freq() const	core::pack::annealer::SimAnnealerBase	protected
clear()	core::pack::annealer::SimAnnealerBase	protected
cool()	core::pack::annealer::MultiCoolAnnealer	private
current_rot_index()	core::pack::annealer::SimAnnealerBase	protected
current_rot_index() const	core::pack::annealer::SimAnnealerBase	protected
energy_top_	core::pack::annealer::MultiCoolAnnealer	private
FixbbRotamerSetsCOP typedef	core::pack::annealer::RotamerAssigningAnnealer
get_calc_rot_freq() const	core::pack::annealer::SimAnnealerBase
get_hightemp() const	core::pack::annealer::SimAnnealerBase	inlineprotected
get_inneriterations() const	core::pack::annealer::SimAnnealerBase
get_lowtemp() const	core::pack::annealer::SimAnnealerBase	inlineprotected
get_outeriterations() const	core::pack::annealer::SimAnnealerBase
get_start_with_current() const	core::pack::annealer::SimAnnealerBase
get_temperature() const	core::pack::annealer::SimAnnealerBase
hightemp	core::pack::annealer::SimAnnealerBase	protectedstatic
ig_	core::pack::annealer::MultiCoolAnnealer	private
lowtemp	core::pack::annealer::SimAnnealerBase	protectedstatic
maxouteriterations	core::pack::annealer::SimAnnealerBase	protectedstatic
MultiCoolAnnealer(task::PackerTaskCOP task, utility::vector0< int > &rot_to_pack, ObjexxFCL::FArray1D_int &bestrotamer_at_seqpos, core::PackerEnergy &bestenergy, bool start_with_current, interaction_graph::AnnealableGraphBaseOP ig, FixbbRotamerSetsCOP rotamer_sets, ObjexxFCL::FArray1_int &current_rot_index, bool calc_rot_freq, ObjexxFCL::FArray1D< core::PackerEnergy > &rot_freq)	core::pack::annealer::MultiCoolAnnealer
MultiCoolAnnealer(task::PackerTaskCOP task, ObjexxFCL::FArray1D_int &bestrotamer_at_seqpos, core::PackerEnergy &bestenergy, bool start_with_current, interaction_graph::AnnealableGraphBaseOP ig, FixbbRotamerSetsCOP rotamer_sets, ObjexxFCL::FArray1_int &current_rot_index, bool calc_rot_freq, ObjexxFCL::FArray1D< core::PackerEnergy > &rot_freq)	core::pack::annealer::MultiCoolAnnealer
MultiCoolAnnealer(MultiCoolAnnealer const &rhs)	core::pack::annealer::MultiCoolAnnealer	private
nsteps_	core::pack::annealer::MultiCoolAnnealer	private
nsteps_for_rot_	core::pack::annealer::MultiCoolAnnealer	private
num_rots_to_pack() const	core::pack::annealer::SimAnnealerBase	inlineprotected
num_rots_to_pack(Size setting)	core::pack::annealer::SimAnnealerBase	protected
num_top_kept_	core::pack::annealer::MultiCoolAnnealer	private
operator=(MultiCoolAnnealer const &rhs)	core::pack::annealer::MultiCoolAnnealer	private
pass_metropolis(core::PackerEnergy delta_energy) const	core::pack::annealer::SimAnnealerBase
pass_metropolis(core::PackerEnergy previous_energy, core::PackerEnergy delta_energy) const	core::pack::annealer::SimAnnealerBase
pick_a_rotamer(int cycle)	core::pack::annealer::RotamerAssigningAnnealer
pick_a_rotamer_for_node(int node) const	core::pack::annealer::RotamerAssigningAnnealer
quench() const	core::pack::annealer::SimAnnealerBase
rot_freq()	core::pack::annealer::SimAnnealerBase	protected
rot_freq() const	core::pack::annealer::SimAnnealerBase	protected
rot_to_pack() const	core::pack::annealer::RotamerAssigningAnnealer	protected
rotamer_sets() const	core::pack::annealer::RotamerAssigningAnnealer	protected
RotamerAssigningAnnealer(int num_of_rot_to_pack, ObjexxFCL::FArray1D_int &bestrotamer_at_seqpos, core::PackerEnergy &bestenergy, bool start_with_current, FixbbRotamerSetsCOP p_rotamer_set, ObjexxFCL::FArray1_int &current_rot_index, bool calc_rot_freq, ObjexxFCL::FArray1D< core::PackerEnergy > &rot_freq)	core::pack::annealer::RotamerAssigningAnnealer
RotamerAssigningAnnealer(utility::vector0< int > &rot_to_pack, int num_of_rot_to_pack, ObjexxFCL::FArray1D_int &bestrotamer_at_seqpos, core::PackerEnergy &bestenergy, bool start_with_current, FixbbRotamerSetsCOP p_rotamer_set, ObjexxFCL::FArray1_int &current_rot_index, bool calc_rot_freq, ObjexxFCL::FArray1D< core::PackerEnergy > &rot_freq)	core::pack::annealer::RotamerAssigningAnnealer
RotamerSetsBaseCOP typedef	core::pack::annealer::SimAnnealerBase
run() override	core::pack::annealer::MultiCoolAnnealer	virtual
run_constant_temp_rotamer_substitutions(ObjexxFCL::FArray1D_int &state_on_node, ObjexxFCL::FArray1D_int &best_state_on_node, core::PackerEnergy &best_energy, int num_cycles)	core::pack::annealer::MultiCoolAnnealer	private
run_quench(ObjexxFCL::FArray1D_int &state_on_node, ObjexxFCL::FArray1D_int &best_state_on_node, core::PackerEnergy &best_energy, int num_cycles)	core::pack::annealer::MultiCoolAnnealer	private
scale_inneriterations(core::PackerEnergy const si)	core::pack::annealer::SimAnnealerBase	inline
scale_outeriterations(core::PackerEnergy const so)	core::pack::annealer::SimAnnealerBase	inline
set_assign_state_to_all_nodes_immediately(bool setting)	core::pack::annealer::RotamerAssigningAnnealer
set_disallow_quench(bool const &setting)	core::pack::annealer::SimAnnealerBase
set_hightemp(core::PackerEnergy)	core::pack::annealer::SimAnnealerBase
set_lowtemp(core::PackerEnergy)	core::pack::annealer::SimAnnealerBase
set_not_to_quench()	core::pack::annealer::SimAnnealerBase
set_temperature(core::PackerEnergy new_temperature)	core::pack::annealer::SimAnnealerBase
set_to_quench()	core::pack::annealer::SimAnnealerBase
setup_iterations()	core::pack::annealer::SimAnnealerBase
setup_iterations(const int &num_of_state_changes)	core::pack::annealer::SimAnnealerBase
setup_temperature(const int &nn)	core::pack::annealer::SimAnnealerBase
setup_temperature(const ObjexxFCL::FArray1D< core::PackerEnergy > &loopenergy, int nn)	core::pack::annealer::SimAnnealerBase
SimAnnealerBase(int num_rots_to_pack, ObjexxFCL::FArray1D_int &bestrotamer_at_seqpos, core::PackerEnergy &bestenergy, bool start_with_current, ObjexxFCL::FArray1_int &current_rot_index, bool calc_rot_freq, ObjexxFCL::FArray1D< core::PackerEnergy > &rot_freq)	core::pack::annealer::SimAnnealerBase
start_with_current() const	core::pack::annealer::SimAnnealerBase	protected
store_top_energy(ObjexxFCL::FArray1D_int const &state_on_node, core::PackerEnergy energy)	core::pack::annealer::MultiCoolAnnealer	private
top_netstates_	core::pack::annealer::MultiCoolAnnealer	private
top_to_keep	core::pack::annealer::MultiCoolAnnealer	private
uninitialized_energy	core::pack::annealer::MultiCoolAnnealer	privatestatic
which_netstate_worst_top_	core::pack::annealer::MultiCoolAnnealer	private
worst_top_energy_	core::pack::annealer::MultiCoolAnnealer	private
~MultiCoolAnnealer() override	core::pack::annealer::MultiCoolAnnealer
~RotamerAssigningAnnealer() override	core::pack::annealer::RotamerAssigningAnnealer
~SimAnnealerBase() override	core::pack::annealer::SimAnnealerBase