CanonicalSamplingMover.cc File Reference

#include <protocols/canonical_sampling/CanonicalSamplingMover.hh>
#include <protocols/jd2/util.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/pose/Pose.hh>
#include <core/pose/PDBInfo.hh>
#include <core/io/silent/SilentFileData.hh>
#include <core/io/silent/SilentFileOptions.hh>
#include <core/io/silent/SilentStruct.hh>
#include <core/io/silent/SilentStructFactory.hh>
#include <protocols/loops/Loop.hh>
#include <protocols/loops/Loops.hh>
#include <protocols/moves/MoverContainer.hh>
#include <protocols/moves/MonteCarlo.hh>
#include <protocols/canonical_sampling/mc_convergence_checks/Pool_ConvergenceCheck.hh>
#include <protocols/canonical_sampling/mc_convergence_checks/HPool.hh>
#include <protocols/canonical_sampling/mc_convergence_checks/HierarchicalLevel.hh>
#include <protocols/jd2/JobDistributor.hh>
#include <protocols/jd2/JobOutputter.hh>
#include <basic/options/option.hh>
#include <basic/options/after_opts.hh>
#include <basic/options/option_macros.hh>
#include <basic/options/keys/mc.OptionKeys.gen.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <basic/options/keys/loops.OptionKeys.gen.hh>
#include <basic/options/keys/canonical_sampling.OptionKeys.gen.hh>
#include <basic/options/keys/constraints.OptionKeys.gen.hh>
#include <utility/file/file_sys_util.hh>
#include <utility/file/PathName.hh>
#include <utility/file/gzip_util.hh>
#include <core/energy_methods/RG_Energy_Fast.hh>
#include <core/scoring/rms_util.hh>
#include <core/scoring/constraints/AtomPairConstraint.hh>
#include <core/scoring/func/HarmonicFunc.hh>
#include <core/scoring/constraints/util.hh>
#include <core/conformation/Residue.hh>
#include <basic/Tracer.hh>
#include <basic/prof.hh>
#include <fstream>
#include <utility/io/ozstream.hh>
#include <utility/io/izstream.hh>
#include <ObjexxFCL/format.hh>
#include <ObjexxFCL/Fmath.hh>
#include <protocols/jd2/Job.hh>
#include <utility/vector0.hh>
#include <utility/vector1.hh>
#include <core/pack/task/PackerTask.fwd.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::canonical_sampling
	Algorithms for rigorously sampling native state ensembles. See disclaimer in detailed description.

Functions
static basic::Tracer	protocols::canonical_sampling::tr ("protocols.canonical_sampling.CanonicalSamplingMover")
std::string	protocols::canonical_sampling::jobname_dirhash (std::string const &dir_prefix, core::Size nr_dirs)