add_mover_ | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | private |
add_or_delete_mover_ | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | private |
apply(Pose &) override | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | virtual |
apply(core::pose::Pose &pose, StepWiseMove const &stepwise_move, bool const figure_out_all_possible_moves=true) | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | |
apply_legacy(Pose &) | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | |
build_full_model(core::pose::Pose const &start_pose, core::pose::Pose &full_model_pose, bool const &choose_random=false) | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | |
clear_info() | protocols::moves::Mover | inlinevirtual |
clone() const override | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | virtual |
create() | protocols::moves::Mover | virtual |
delete_mover_ | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | private |
do_test_move(StepWiseMove const &move, core::pose::Pose &pose) | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | |
do_the_move(StepWiseMove const &move, core::pose::Pose &pose) | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | |
Filters_map typedef | protocols::moves::Mover | |
fresh_instance() const | protocols::moves::Mover | virtual |
from_scratch_mover_ | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | private |
get_additional_output() | protocols::moves::Mover | virtual |
get_current_job() const | protocols::moves::Mover | |
get_current_tag() const | protocols::moves::Mover | inline |
get_input_pose() const | protocols::moves::Mover | |
get_last_move_status() const | protocols::moves::Mover | |
get_name() const override | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | inlinevirtual |
get_native_pose() const | protocols::moves::Mover | |
get_self_ptr() const | protocols::moves::Mover | inline |
get_self_ptr() | protocols::moves::Mover | inline |
get_self_weak_ptr() const | protocols::moves::Mover | inline |
get_self_weak_ptr() | protocols::moves::Mover | inline |
get_type() const | protocols::moves::Mover | inline |
info() | protocols::moves::Mover | inlinevirtual |
info() const | protocols::moves::Mover | inlinevirtual |
initialize(core::scoring::ScoreFunctionCOP scorefxn, protocols::stepwise::monte_carlo::options::StepWiseMonteCarloOptionsCOP options) | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | |
initialize() | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | private |
initialize_pose_if_empty(core::pose::Pose &pose) | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | |
last_proposal_density_ratio() | protocols::moves::Mover | inlinevirtual |
minimize_single_res_ | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | private |
move_type_string() const | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | inline |
move_type_string_ | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | private |
Mover() | protocols::moves::Mover | |
Mover(std::string const &type_name) | protocols::moves::Mover | |
mover_is_unpublished() const | protocols::moves::Mover | virtual |
mover_provides_citation_info() const | protocols::moves::Mover | virtual |
moves_for_pose(core::pose::Pose const &start_pose, utility::vector1< Size > const &residues_to_rebuild) | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | private |
name() | protocols::moves::Mover | inlinestatic |
num_tested_moves_ | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | private |
options_ | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | private |
parse_my_tag(TagCOP tag, basic::datacache::DataMap &data, Filters_map const &filters, Movers_map const &movers, Pose const &pose) | protocols::moves::Mover | virtual |
Pose typedef | protocols::moves::Mover | |
PoseCOP typedef | protocols::moves::Mover | |
preminimize_pose(core::pose::Pose &pose) | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | |
proposal_density_ratio() const | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | inline |
proposal_density_ratio_ | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | private |
provide_authorship_info_for_unpublished() const | protocols::moves::Mover | virtual |
provide_citation_info() const | protocols::moves::Mover | virtual |
register_options() | protocols::moves::Mover | inlinestatic |
reinitialize_for_each_job() const | protocols::moves::Mover | virtual |
reinitialize_for_new_input() const | protocols::moves::Mover | virtual |
resample_full_model(core::pose::Pose const &start_pose, core::pose::Pose &output_pose, bool const checkpointing_breadcrumbs) | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | |
resample_full_model(core::pose::Pose const &start_pose, core::pose::Pose &output_pose, bool const checkpointing_breadcrumbs, utility::vector1< Size > const &residues_to_resample, Size const resample_round, Size const nstruct) | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | |
resample_mover_ | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | private |
reset_status() | protocols::moves::Mover | |
scorefxn_ | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | private |
set_current_job(protocols::jobdist::BasicJobCOP job) | protocols::moves::Mover | |
set_current_tag(std::string const &new_tag) | protocols::moves::Mover | inlinevirtual |
set_input_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
set_last_move_status(MoverStatus status) | protocols::moves::Mover | protected |
set_minimize_single_res(bool const minimize_single_res) | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | |
set_native_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
set_options(protocols::stepwise::monte_carlo::options::StepWiseMonteCarloOptionsCOP options) | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | |
set_scorefxn(core::scoring::ScoreFunctionCOP scorefxn) | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | inline |
set_submotif_library(monte_carlo::submotif::SubMotifLibraryCOP setting) | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | inline |
set_type(std::string const &setting) | protocols::moves::Mover | inline |
show(std::ostream &output=std::cout) const | protocols::moves::Mover | virtual |
stepwise_modeler_ | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | private |
stepwise_move_selector() const | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | inline |
stepwise_move_selector_ | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | private |
StepWiseMasterMover(core::scoring::ScoreFunctionCOP scorefxn, protocols::stepwise::monte_carlo::options::StepWiseMonteCarloOptionsCOP options) | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | |
StepWiseMasterMover(StepWiseMasterMover const &src) | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | |
Strings typedef | protocols::moves::Mover | |
submotif_library_ | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | private |
success() const | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | inline |
success_ | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | private |
TagCOP typedef | protocols::moves::Mover | |
test_all_moves(core::pose::Pose &pose) | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | private |
test_all_moves_recursively(core::pose::Pose &pose) | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | private |
test_move(Pose &pose) | protocols::moves::Mover | inlinevirtual |
type(const std::string &type_in) | protocols::moves::Mover | inline |
type() const | protocols::moves::Mover | inline |
vary_loop_length_mover_ | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | private |
~StepWiseMasterMover() override | protocols::stepwise::monte_carlo::mover::StepWiseMasterMover | |