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Rosetta
2020.11
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This is the complete list of members for protocols::scoring::methods::SpecialRotamerEnergy, including all inherited members.
clone() const override | protocols::scoring::methods::SpecialRotamerEnergy | virtual |
ContextIndependentOneBodyEnergy(EnergyMethodCreatorOP) | core::scoring::methods::ContextIndependentOneBodyEnergy | |
defines_dof_derivatives(pose::Pose const &p) const | core::scoring::methods::OneBodyEnergy | virtual |
defines_high_order_terms(pose::Pose const &) const | core::scoring::methods::EnergyMethod | virtual |
defines_score_for_residue(conformation::Residue const &) const | core::scoring::methods::OneBodyEnergy | virtual |
energy_method_is_unpublished() const | core::scoring::methods::EnergyMethod | virtual |
energy_method_provides_citation_info() const | core::scoring::methods::EnergyMethod | virtual |
EnergyMethod(EnergyMethodCreatorOP creator) | core::scoring::methods::EnergyMethod | |
eval_atom_derivative(id::AtomID const &id, pose::Pose const &pose, kinematics::DomainMap const &domain_map, ScoreFunction const &sfxn, EnergyMap const &emap, Vector &F1, Vector &F2) const | core::scoring::methods::EnergyMethod | virtual |
eval_dof_derivative(core::id::DOF_ID const &dof_id, core::id::TorsionID const &tor_id, core::pose::Pose const &pose, core::scoring::ScoreFunction const &sfxn, core::scoring::EnergyMap const &weights) const | protocols::scoring::methods::SpecialRotamerEnergy | virtual |
eval_residue_derivatives(conformation::Residue const &rsd, ResSingleMinimizationData const &min_data, pose::Pose const &pose, EnergyMap const &weights, utility::vector1< DerivVectorPair > &atom_derivs) const | core::scoring::methods::OneBodyEnergy | virtual |
eval_residue_dof_derivative(conformation::Residue const &rsd, ResSingleMinimizationData const &min_data, id::DOF_ID const &dof_id, id::TorsionID const &torsion_id, pose::Pose const &pose, ScoreFunction const &sfxn, EnergyMap const &weights) const | core::scoring::methods::OneBodyEnergy | virtual |
finalize_after_derivatives(pose::Pose &, ScoreFunction const &) const | core::scoring::methods::EnergyMethod | virtual |
finalize_after_minimizing(pose::Pose &pose) const | core::scoring::methods::EnergyMethod | virtual |
finalize_total_energy(pose::Pose &pose, ScoreFunction const &sfxn, EnergyMap &total_energy) const | core::scoring::methods::EnergyMethod | virtual |
indicate_required_context_graphs(utility::vector1< bool > &) const override | protocols::scoring::methods::SpecialRotamerEnergy | virtual |
method_type() const override | core::scoring::methods::ContextIndependentOneBodyEnergy | virtual |
minimize_in_whole_structure_context(pose::Pose const &) const | core::scoring::methods::EnergyMethod | virtual |
OneBodyEnergy(EnergyMethodCreatorOP) | core::scoring::methods::OneBodyEnergy | |
parent typedef | protocols::scoring::methods::SpecialRotamerEnergy | |
prepare_rotamers_for_packing(pose::Pose const &, conformation::RotamerSetBase &) const | core::scoring::methods::EnergyMethod | virtual |
provide_authorship_info_for_unpublished() const | core::scoring::methods::EnergyMethod | virtual |
provide_citation_info() const | core::scoring::methods::EnergyMethod | virtual |
requires_a_setup_for_derivatives_for_residue_opportunity(pose::Pose const &pose) const | core::scoring::methods::OneBodyEnergy | virtual |
requires_a_setup_for_scoring_for_residue_opportunity_during_minimization(pose::Pose const &pose) const | core::scoring::methods::OneBodyEnergy | virtual |
requires_a_setup_for_scoring_for_residue_opportunity_during_regular_scoring(pose::Pose const &pose) const | core::scoring::methods::EnergyMethod | virtual |
residue_energy(core::conformation::Residue const &rsd, core::pose::Pose const &pose, core::scoring::EnergyMap &emap) const override | protocols::scoring::methods::SpecialRotamerEnergy | virtual |
residue_energy_ext(conformation::Residue const &rsd, ResSingleMinimizationData const &min_data, pose::Pose const &pose, EnergyMap &emap) const | core::scoring::methods::OneBodyEnergy | virtual |
score_types() const | core::scoring::methods::EnergyMethod | inline |
set_score_types(EnergyMethodCreatorOP creator) | core::scoring::methods::EnergyMethod | protected |
setup_for_derivatives(pose::Pose &pose, ScoreFunction const &sfxn) const | core::scoring::methods::EnergyMethod | virtual |
setup_for_derivatives_for_residue(conformation::Residue const &rsd, pose::Pose const &pose, ScoreFunction const &sfxn, ResSingleMinimizationData &min_data, basic::datacache::BasicDataCache &res_data_cache) const | core::scoring::methods::OneBodyEnergy | virtual |
setup_for_minimizing(pose::Pose &, ScoreFunction const &, kinematics::MinimizerMapBase const &) const | core::scoring::methods::EnergyMethod | virtual |
setup_for_minimizing_for_residue(conformation::Residue const &rsd, pose::Pose const &, ScoreFunction const &, kinematics::MinimizerMapBase const &, basic::datacache::BasicDataCache &, ResSingleMinimizationData &) const | core::scoring::methods::OneBodyEnergy | virtual |
setup_for_packing(pose::Pose &, utility::vector1< bool > const &, utility::vector1< bool > const &) const | core::scoring::methods::EnergyMethod | virtual |
setup_for_packing_with_rotsets(pose::Pose &pose, pack_basic::RotamerSetsBaseOP const &rotsets, ScoreFunction const &sfxn) const | core::scoring::methods::EnergyMethod | virtual |
setup_for_scoring(pose::Pose &, ScoreFunction const &) const | core::scoring::methods::EnergyMethod | virtual |
setup_for_scoring_for_residue(conformation::Residue const &rsd, pose::Pose const &pose, ScoreFunction const &sfxn, ResSingleMinimizationData &min_data) const | core::scoring::methods::OneBodyEnergy | virtual |
core::scoring::methods::EnergyMethod::setup_for_scoring_for_residue(conformation::Residue const &rsd, pose::Pose const &pose, ScoreFunction const &sfxn, basic::datacache::BasicDataCache &residue_data_cache) const | core::scoring::methods::EnergyMethod | virtual |
show_additional_info(std::ostream &, pose::Pose &, bool) const | core::scoring::methods::EnergyMethod | virtual |
SpecialRotamerEnergy() | protocols::scoring::methods::SpecialRotamerEnergy | |
update_residue_for_packing(pose::Pose &, Size resid) const | core::scoring::methods::EnergyMethod | virtual |
use_extended_residue_energy_interface() const | core::scoring::methods::OneBodyEnergy | virtual |
version() const override | protocols::scoring::methods::SpecialRotamerEnergy | virtual |
~OneBodyEnergy() override | core::scoring::methods::OneBodyEnergy |