| apply(core::pose::Pose &pose) override | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | virtual |
| apply_solutions(core::pose::Pose &pose) | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | private |
| atom_ids_ | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | private |
| b_ang_ | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | private |
| b_len_ | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | private |
| chainbreak_suite_ | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | private |
| choose_best_solution_ | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | private |
| choose_best_solution_based_on_score_function(core::scoring::ScoreFunctionOP scorefxn) | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | |
| choose_least_perturb_solution() | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | |
| choose_least_perturb_solution_ | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | private |
| clear_info() | protocols::moves::Mover | inlinevirtual |
| clone() const override | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | virtual |
| close_at_cutpoint(core::pose::Pose &pose) | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | private |
| create() | protocols::moves::Mover | virtual |
| dof_ids_ | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | private |
| figure_out_dof_ids_and_offsets(core::pose::Pose const &pose, utility::vector1< core::Real > const &dt_ang) | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | private |
| figure_out_offset(core::pose::Pose const &pose, core::id::DOF_ID const &dof_id, core::Real const &original_torsion_value, utility::vector1< core::Real > &offset_save) | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | private |
| fill_chainTORS(core::pose::Pose const &pose, utility::vector1< core::id::NamedAtomID > const &atom_ids, utility::vector1< utility::fixedsizearray1< core::Real, 3 > > &atoms, utility::vector1< core::Real > &dt_ang, utility::vector1< core::Real > &db_ang, utility::vector1< core::Real > &db_len) const | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | private |
| fill_solution(core::pose::Pose &pose, core::Size const n) const | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | |
| Filters_map typedef | protocols::moves::Mover | |
| fresh_instance() const | protocols::moves::Mover | virtual |
| get_additional_output() | protocols::moves::Mover | virtual |
| get_all_solutions(core::pose::Pose &pose, utility::vector1< core::pose::PoseOP > &pose_list) | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | |
| get_current_job() const | protocols::moves::Mover | |
| get_current_tag() const | protocols::moves::Mover | inline |
| get_input_pose() const | protocols::moves::Mover | |
| get_last_move_status() const | protocols::moves::Mover | |
| get_name() const override | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | inlinevirtual |
| get_native_pose() const | protocols::moves::Mover | |
| get_self_ptr() const | protocols::moves::Mover | inline |
| get_self_ptr() | protocols::moves::Mover | inline |
| get_self_weak_ptr() const | protocols::moves::Mover | inline |
| get_self_weak_ptr() | protocols::moves::Mover | inline |
| get_torsions(core::Size const n) | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | |
| get_torsions_for_all_solutions() | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | |
| get_type() const | protocols::moves::Mover | inline |
| info() | protocols::moves::Mover | inlinevirtual |
| info() const | protocols::moves::Mover | inlinevirtual |
| last_proposal_density_ratio() | protocols::moves::Mover | inlinevirtual |
| Mover() | protocols::moves::Mover | |
| Mover(std::string const &type_name) | protocols::moves::Mover | |
| mover_is_unpublished() const | protocols::moves::Mover | virtual |
| mover_provides_citation_info() const | protocols::moves::Mover | virtual |
| moving_suite_ | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | private |
| name() | protocols::moves::Mover | inlinestatic |
| nsol() | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | inline |
| nsol_ | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | private |
| offset_save_ | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | private |
| output_chainTORS(utility::vector1< core::Real > const &dt_ang, utility::vector1< core::Real > const &db_ang, utility::vector1< core::Real > const &db_len) const | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | private |
| parse_my_tag(TagCOP tag, basic::datacache::DataMap &data, Filters_map const &filters, Movers_map const &movers, Pose const &pose) | protocols::moves::Mover | virtual |
| Pose typedef | protocols::moves::Mover | |
| PoseCOP typedef | protocols::moves::Mover | |
| provide_authorship_info_for_unpublished() const | protocols::moves::Mover | virtual |
| provide_citation_info() const | protocols::moves::Mover | virtual |
| register_options() | protocols::moves::Mover | inlinestatic |
| reinitialize_for_each_job() const | protocols::moves::Mover | virtual |
| reinitialize_for_new_input() const | protocols::moves::Mover | virtual |
| reset_status() | protocols::moves::Mover | |
| RNA_AnalyticLoopCloser(core::Size const moving_suite, core::Size const chainbreak_suite) | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | |
| scorefxn_ | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | private |
| set_current_job(protocols::jobdist::BasicJobCOP job) | protocols::moves::Mover | |
| set_current_tag(std::string const &new_tag) | protocols::moves::Mover | inlinevirtual |
| set_input_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_last_move_status(MoverStatus status) | protocols::moves::Mover | protected |
| set_native_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_type(std::string const &setting) | protocols::moves::Mover | inline |
| show(std::ostream &output=std::cout) const | protocols::moves::Mover | virtual |
| Strings typedef | protocols::moves::Mover | |
| t_ang_ | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | private |
| TagCOP typedef | protocols::moves::Mover | |
| test_move(Pose &pose) | protocols::moves::Mover | inlinevirtual |
| type(const std::string &type_in) | protocols::moves::Mover | inline |
| type() const | protocols::moves::Mover | inline |
| verbose_ | protocols::stepwise::legacy::modeler::rna::RNA_AnalyticLoopCloser | private |
1.8.7