apply(core::pose::Pose &pose) override | protocols::canonical_sampling::TrajectoryRecorder | virtual |
attributes_for_trajectory_recorder(utility::tag::AttributeList &) | protocols::canonical_sampling::TrajectoryRecorder | static |
cache_limit() | protocols::canonical_sampling::TrajectoryRecorder | inline |
cache_limit(core::Size limit) | protocols::canonical_sampling::TrajectoryRecorder | inline |
clear_info() | protocols::moves::Mover | inlinevirtual |
clone() const override | protocols::canonical_sampling::SilentTrajectoryRecorder | virtual |
create() | protocols::moves::Mover | virtual |
cumulate_jobs() const | protocols::canonical_sampling::TrajectoryRecorder | inline |
cumulate_replicas() const | protocols::canonical_sampling::TrajectoryRecorder | inline |
file_name() const | protocols::canonical_sampling::TrajectoryRecorder | inline |
file_name(std::string const &file_name) | protocols::canonical_sampling::TrajectoryRecorder | inline |
Filters_map typedef | protocols::moves::Mover | |
finalize_simulation(core::pose::Pose &, MetropolisHastingsMover const &) | protocols::canonical_sampling::ThermodynamicObserver | inlinevirtual |
fresh_instance() const override | protocols::canonical_sampling::SilentTrajectoryRecorder | virtual |
get_additional_output() | protocols::moves::Mover | virtual |
get_current_job() const | protocols::moves::Mover | |
get_current_tag() const | protocols::moves::Mover | inline |
get_input_pose() const | protocols::moves::Mover | |
get_last_move_status() const | protocols::moves::Mover | |
get_name() const override | protocols::canonical_sampling::SilentTrajectoryRecorder | virtual |
get_native_pose() const | protocols::moves::Mover | |
get_self_ptr() const | protocols::moves::Mover | inline |
get_self_ptr() | protocols::moves::Mover | inline |
get_self_weak_ptr() const | protocols::moves::Mover | inline |
get_self_weak_ptr() | protocols::moves::Mover | inline |
get_type() const | protocols::moves::Mover | inline |
info() | protocols::moves::Mover | inlinevirtual |
info() const | protocols::moves::Mover | inlinevirtual |
initialize_simulation(core::pose::Pose &pose, protocols::canonical_sampling::MetropolisHastingsMover const &metropolis_hastings_mover, core::Size cycle) override | protocols::canonical_sampling::SilentTrajectoryRecorder | virtual |
job_outputter_ | protocols::canonical_sampling::SilentTrajectoryRecorder | private |
last_proposal_density_ratio() | protocols::moves::Mover | inlinevirtual |
model_count() const | protocols::canonical_sampling::TrajectoryRecorder | inline |
Mover() | protocols::moves::Mover | |
Mover(std::string const &type_name) | protocols::moves::Mover | |
mover_is_unpublished() const | protocols::moves::Mover | virtual |
mover_name() | protocols::canonical_sampling::SilentTrajectoryRecorder | static |
mover_provides_citation_info() const | protocols::moves::Mover | virtual |
name() | protocols::moves::Mover | inlinestatic |
observe_after_metropolis(protocols::canonical_sampling::MetropolisHastingsMover const &metropolis_hastings_mover) override | protocols::canonical_sampling::SilentTrajectoryRecorder | virtual |
options_registered_ | protocols::canonical_sampling::SilentTrajectoryRecorder | protectedstatic |
Parent typedef | protocols::canonical_sampling::SilentTrajectoryRecorder | |
parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &data, protocols::filters::Filters_map const &filters, protocols::moves::Movers_map const &movers, core::pose::Pose const &pose) override | protocols::canonical_sampling::SilentTrajectoryRecorder | virtual |
Pose typedef | protocols::moves::Mover | |
PoseCOP typedef | protocols::moves::Mover | |
provide_authorship_info_for_unpublished() const | protocols::moves::Mover | virtual |
provide_citation_info() const | protocols::moves::Mover | virtual |
provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd) | protocols::canonical_sampling::SilentTrajectoryRecorder | static |
register_options() | protocols::canonical_sampling::SilentTrajectoryRecorder | static |
reinitialize_for_each_job() const | protocols::moves::Mover | virtual |
reinitialize_for_new_input() const | protocols::moves::Mover | virtual |
requires_pose() | protocols::canonical_sampling::ThermodynamicObserver | inlinevirtual |
reset(protocols::moves::MonteCarlo const &mc, protocols::canonical_sampling::MetropolisHastingsMover const *metropolis_hastings_mover=nullptr) | protocols::canonical_sampling::TrajectoryRecorder | virtual |
reset_status() | protocols::moves::Mover | |
restart_simulation(core::pose::Pose &pose, protocols::canonical_sampling::MetropolisHastingsMover &metropolis_hastings_mover, core::Size &cycle, core::Size &temp_level, core::Real &temperature) override | protocols::canonical_sampling::SilentTrajectoryRecorder | virtual |
score_stride_ | protocols::canonical_sampling::SilentTrajectoryRecorder | protected |
set_current_job(protocols::jobdist::BasicJobCOP job) | protocols::moves::Mover | |
set_current_tag(std::string const &new_tag) | protocols::moves::Mover | inlinevirtual |
set_input_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
set_last_move_status(MoverStatus status) | protocols::moves::Mover | protected |
set_native_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
set_type(std::string const &setting) | protocols::moves::Mover | inline |
show(std::ostream &output=std::cout) const | protocols::moves::Mover | virtual |
SilentTrajectoryRecorder() | protocols::canonical_sampling::SilentTrajectoryRecorder | |
SilentTrajectoryRecorder(SilentTrajectoryRecorder const &) | protocols::canonical_sampling::SilentTrajectoryRecorder | |
step_count() const | protocols::canonical_sampling::TrajectoryRecorder | inline |
stride() const | protocols::canonical_sampling::TrajectoryRecorder | inline |
stride(core::Size stride) | protocols::canonical_sampling::TrajectoryRecorder | inline |
Strings typedef | protocols::moves::Mover | |
TagCOP typedef | protocols::moves::Mover | |
test_move(Pose &pose) | protocols::moves::Mover | inlinevirtual |
ThermodynamicObserver() | protocols::canonical_sampling::ThermodynamicObserver | |
TrajectoryRecorder() | protocols::canonical_sampling::TrajectoryRecorder | |
TrajectoryRecorder(TrajectoryRecorder const &) | protocols::canonical_sampling::TrajectoryRecorder | |
type(const std::string &type_in) | protocols::moves::Mover | inline |
type() const | protocols::moves::Mover | inline |
update_after_boltzmann(core::pose::Pose const &pose, protocols::canonical_sampling::MetropolisHastingsMover const *metropolis_hastings_mover=nullptr) | protocols::canonical_sampling::TrajectoryRecorder | |
update_after_boltzmann(protocols::moves::MonteCarlo const &mc) | protocols::canonical_sampling::TrajectoryRecorder | |
write_model(core::pose::Pose const &pose, protocols::canonical_sampling::MetropolisHastingsMover const *metropolis_hastings_mover=nullptr) override | protocols::canonical_sampling::SilentTrajectoryRecorder | protectedvirtual |
~ThermodynamicObserver() override | protocols::canonical_sampling::ThermodynamicObserver | |
~TrajectoryRecorder() override | protocols::canonical_sampling::TrajectoryRecorder | |