protocols::pockets::PocketConstraint Member List

This is the complete list of members for protocols::pockets::PocketConstraint, including all inherited members.

angles_	protocols::pockets::PocketConstraint	private
atom(core::Size const index) const override	protocols::pockets::PocketConstraint	inlinevirtual
atom_ids_	protocols::pockets::PocketConstraint	private
AtomID typedef	core::scoring::constraints::Constraint
choose_effective_sequence_separation(core::kinematics::ShortestPathInFoldTree const &sp, numeric::random::RandomGenerator &)	core::scoring::constraints::Constraint	virtual
clone() const override	protocols::pockets::PocketConstraint	virtual
core::scoring::constraints::Constraint::clone(func::FuncOP) const	core::scoring::constraints::Constraint	virtual
Constraint(ScoreType const &t)	core::scoring::constraints::Constraint
dist(core::scoring::func::XYZ_Func const &) const override	protocols::pockets::PocketConstraint	inlinevirtual
core::scoring::constraints::Constraint::dist(core::pose::Pose const &) const	core::scoring::constraints::Constraint	virtual
dumppdb_	protocols::pockets::PocketConstraint	private
effective_sequence_separation(core::kinematics::ShortestPathInFoldTree const &) const	core::scoring::constraints::Constraint	virtual
fill_f1_f2(core::id::AtomID const &, core::scoring::func::XYZ_Func const &, core::Vector &, core::Vector &, core::scoring::EnergyMap const &weights) const override	protocols::pockets::PocketConstraint
core::scoring::constraints::Constraint::fill_f1_f2(AtomID const &atom, core::scoring::func::XYZ_Func const &xyz_func, Vector &F1, Vector &F2, EnergyMap const &weights) const =0	core::scoring::constraints::Constraint	pure virtual
get_func() const	core::scoring::constraints::Constraint	virtual
init(core::pose::Pose const &pose)	protocols::pockets::PocketConstraint
natoms() const override	protocols::pockets::PocketConstraint	inlinevirtual
operator!=(Constraint const &other) const	core::scoring::constraints::Constraint
operator==(core::scoring::constraints::Constraint const &other) const override	protocols::pockets::PocketConstraint	virtual
PocketConstraint()	protocols::pockets::PocketConstraint
PocketConstraint(core::pose::Pose const &pose)	protocols::pockets::PocketConstraint
PocketConstraint(const PocketConstraint &old)	protocols::pockets::PocketConstraint
pocketgrid_	protocols::pockets::PocketConstraint	mutableprivate
read_constraint(std::istream &, core::pose::Pose const &)	core::scoring::constraints::Constraint	virtual
read_data(std::istream &)	core::scoring::constraints::Constraint	virtual
read_def(std::istream &in, core::pose::Pose const &pose, core::scoring::func::FuncFactory const &func_factory) override	protocols::pockets::PocketConstraint	virtual
remap_resid(core::id::SequenceMapping const &) const	core::scoring::constraints::Constraint	virtual
remapped_clone(pose::Pose const &, pose::Pose const &, id::SequenceMappingCOP map) const	core::scoring::constraints::Constraint	virtual
residues() const	core::scoring::constraints::Constraint	virtual
residues_	protocols::pockets::PocketConstraint	private
same_type_as_me(core::scoring::constraints::Constraint const &other) const override	protocols::pockets::PocketConstraint	virtual
score(core::scoring::func::XYZ_Func const &xyz_func, core::scoring::EnergyMap const &weights, core::scoring::EnergyMap &emap) const override	protocols::pockets::PocketConstraint	virtual
core::scoring::constraints::Constraint::score(pose::Pose const &pose) const	core::scoring::constraints::Constraint	virtual
core::scoring::constraints::Constraint::score(pose::Pose const &pose, EnergyMap const &weights) const	core::scoring::constraints::Constraint	virtual
score_type() const	core::scoring::constraints::Constraint	inline
seqpos_	protocols::pockets::PocketConstraint	private
set_target_res(core::pose::Pose const &pose, core::Size new_seqpos)	protocols::pockets::PocketConstraint
set_target_res_pdb(core::pose::Pose const &pose, std::string resid)	protocols::pockets::PocketConstraint
setup_for_derivatives(core::scoring::func::XYZ_Func const &, ScoreFunction const &) const	core::scoring::constraints::Constraint	virtual
setup_for_scoring(core::scoring::func::XYZ_Func const &, ScoreFunction const &) const	core::scoring::constraints::Constraint	virtual
show(std::ostream &) const	core::scoring::constraints::Constraint	virtual
show_def(std::ostream &out, core::pose::Pose const &pose) const override	protocols::pockets::PocketConstraint	virtual
show_violations(std::ostream &out, pose::Pose const &, Size, Real threshold=1) const	core::scoring::constraints::Constraint	virtual
steal_def(pose::Pose const &)	core::scoring::constraints::Constraint	virtual
target_res() const	protocols::pockets::PocketConstraint	inline
to_string() const	core::scoring::constraints::Constraint
totalres_	protocols::pockets::PocketConstraint	private
type() const override	protocols::pockets::PocketConstraint	inlinevirtual
weight_	protocols::pockets::PocketConstraint	private
~Constraint() override	core::scoring::constraints::Constraint
~PocketConstraint() override	protocols::pockets::PocketConstraint