clear_torsion_string_stack() | protocols::loops::loop_closure::kinematic_closure::KinematicPerturber | inline |
get_movemap() const | protocols::loops::loop_closure::kinematic_closure::KinematicPerturber | |
initialize_betaresidue_minima(utility::vector1< core::Real > &philist, utility::vector1< core::Real > &thetalist, utility::vector1< core::Real > &psilist, const core::Size mode) const | protocols::loops::loop_closure::kinematic_closure::TorsionSamplingKinematicPerturber | |
KinematicPerturber() | protocols::loops::loop_closure::kinematic_closure::KinematicPerturber | |
kinmover() const | protocols::loops::loop_closure::kinematic_closure::KinematicPerturber | |
max_sample_iterations() const | protocols::loops::loop_closure::kinematic_closure::KinematicPerturber | inline |
parent typedef | protocols::loops::loop_closure::kinematic_closure::TorsionSamplingKinematicPerturber | |
perturb_beta_residue(core::Real &phi, core::Real &theta, core::Real &psi, const core::Size beta_residue_type) const | protocols::loops::loop_closure::kinematic_closure::TorsionSamplingKinematicPerturber | |
perturb_chain(core::pose::Pose const &pose, utility::vector1< core::Real > &torsions, utility::vector1< core::Real > &bond_ang, utility::vector1< core::Real > &) override | protocols::loops::loop_closure::kinematic_closure::TorsionSamplingKinematicPerturber | virtual |
perturber_exhausted() const | protocols::loops::loop_closure::kinematic_closure::KinematicPerturber | inlinevirtual |
perturber_type() const override | protocols::loops::loop_closure::kinematic_closure::TorsionSamplingKinematicPerturber | inlinevirtual |
rama_ | protocols::loops::loop_closure::kinematic_closure::TorsionSamplingKinematicPerturber | private |
sample_omega_for_pre_prolines_ | protocols::loops::loop_closure::kinematic_closure::TorsionSamplingKinematicPerturber | private |
set_kinmover(KinematicMoverCAP kinmover) | protocols::loops::loop_closure::kinematic_closure::KinematicPerturber | inline |
set_max_sample_iterations(core::Size sample_its) | protocols::loops::loop_closure::kinematic_closure::KinematicPerturber | inline |
set_movemap(core::kinematics::MoveMapCOP mm) | protocols::loops::loop_closure::kinematic_closure::KinematicPerturber | |
set_pose_after_closure(core::pose::Pose &pose, utility::vector1< core::Real > const &torsions, utility::vector1< core::Real > const &bond_ang, utility::vector1< core::Real > const &bond_len, bool closure_successful) const override | protocols::loops::loop_closure::kinematic_closure::TorsionSamplingKinematicPerturber | virtual |
set_vary_ca_bond_angles(bool vary_ca_bond_angles) | protocols::loops::loop_closure::kinematic_closure::TorsionSamplingKinematicPerturber | inline |
TorsionSamplingKinematicPerturber(KinematicMoverCAP kinmover_in) | protocols::loops::loop_closure::kinematic_closure::TorsionSamplingKinematicPerturber | |
vary_ca_bond_angles_ | protocols::loops::loop_closure::kinematic_closure::TorsionSamplingKinematicPerturber | private |
~KinematicPerturber() override | protocols::loops::loop_closure::kinematic_closure::KinematicPerturber | |
~TorsionSamplingKinematicPerturber() override | protocols::loops::loop_closure::kinematic_closure::TorsionSamplingKinematicPerturber | |