Hello, I use the rosetta VIP.
I can not understand the option -cp:skip_relax.
If it appear in the flag, will the option -cp:relax_mover and -cp:local_relax be invalid?
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The option -cp:skip_relax is read before -cp:local_relax is.
If -cp:skip_relax is present, it will be the behavior which dominates. (The value set for -cp:local_relax won't even be consulted.) If both are present, it won't be an error per se, but you may get a warning message about the -cp:local_relax option being set but not used.