Just trying to model a small molecule and how it interacts w/ my bigger protein in pyrosetta.
I got this far:
pose2 = Pose()
nonstandard_residue_set = generate_nonstandard_residue_set(pose2, ["ARA2.params"])
pose = pose_from_pdb(nonstandard_residue_set, "combine.pdb")
But pose_from_pdb only takes only 1 argument, how do I get around this?