# Question with rosetta AbPredict tutorial

1 post / 0 new
Question with rosetta AbPredict tutorial
#1

Hi,

I am new to rosetta and just started working on some tutorials. I am currently trying to use AbPredict code to generate sample structures by trying to execute tutorial documents at https://zhuanlan.zhihu.com/p/82235565 and also at rosetta_bin_linux_2020.50.61505_bundle/main/demos/tutorials/AbPredict. However, I am having following questions.

1. create_run.sh file at the rosetta_bin_linux_2020.50.61505_bundle has a syntax issue and the one with the link works perfectly.

2. When I tried to build the model after running the create_run.sh using the following command, I am getting the following error

rosetta_scripts.mpi.linuxgccrelease @flags -parser:script_vars entry_H1_H2=5CD3E entry_L1_L2=4WCYL entry_H3=4YBQD entry_L3=4GAGL sequence=MVLTQSPASLAVSLGQRATISCKASQSVDYDGDSYMNWYQQKPGQPPKLLIYVASNLKSGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSNEDPFTFGSGTKLEVQLQQSGPELVKPGASVKMSCKASGYTFTDYYMKWVKQSHGKSLEWIGDINPNNGGTGYNQKFKGKATLTVDKSSSTAYMQLNSLTSEDSAVYYCANDYGSTYGFAYWGQGTLVTVS

I am new to Rosetta and please let me know if there are any additional files that could be helpful for you. I have attached the crash log file and the flag file.

" [FILE]: src/protocols/rosetta_scripts/ParsedProtocol.cc [LINE]: 169 [START_MESSAGE] [ ERROR ] UtilityExitException ERROR: Assertion n_steps_passed_in_previous_run_ == steps_.size() failed. [END_MESSAGE] [END_CRASH_REPORT]"

AttachmentSize
5.79 KB
377 bytes
Post Situation:
Mon, 2021-01-25 09:24
terabithia2011