I am building a model using a low-resolution (>15A) cryoEM map. How can I compute the CC (or similar) with Rosetta?
The density score (e.g. elec_dens_fast) should correlate directly to the CC.
But if you want to calculate them more directly, the density_tools application should be able to give you that information. Alternatively, if you want to put it as part of a bigger RosettaScripts application, the ReportFSC mover should also be useful.