You are here

ideal A-form RNA Helix

1 post / 0 new
ideal A-form RNA Helix
#1

The tutorial (https://nbviewer.org/github/RosettaCommons/PyRosetta.notebooks/blob/master/notebooks/14.00-RNA-Basics.ipynb) claims that using:

assembler = core.import_pose.RNA_HelixAssembler()
helix_pose = assembler.build_init_pose('ggggggg','ccccccc')

should generate an ideal A-form RNA helix. However, the longest the sequence the closer the base pairs are coming together and a non relasitc helix is produced (see rna.png).

Am I missing something to get an ideal A-form RNA helix?

AttachmentSize
rna.png119.76 KB
Category: 
Post Situation: 
Wed, 2023-05-17 03:01
tspich