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Alanine Scanning of UbcH7- E6AP Interface

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Alanine Scanning of UbcH7- E6AP Interface
#1

Hi,

I am new to Rosetta.
I would like to try the Alanine scanning example under the heading Design of Protein Protein Interactions - available at http://www.rosettacommons.org/tiki/tiki-index.php?page=Quick+Start&highl...

I did not find the trimmed down version of 1c4z.pdb structure file in the Rosetta 2.0, 2.1.1 or 2.3.0

Could someone please let me know where is it located. I can as well download the structure from PDB but would like to follow the example for my understanding.

I will appreciate any help in this regard.

Thank you.

Mon, 2009-03-23 15:58
suj88

Hi,

You can find the trimmed version of 1c4z.pdb in RosettaExamples/RosettaUserGuide/AlanineScanExample/ which can be downloaded from the software section of rosettacommons.

Regards,
Kristian

> Hi,
>
> I am new to Rosetta.
> I would like to try the Alanine scanning example under the heading Design of Protein Protein Interactions - available at http://www.rosettacommons.org/tiki/tiki-index.php?page=Quick+Start&highl...
>
> I did not find the trimmed down version of 1c4z.pdb structure file in the Rosetta 2.0, 2.1.1 or 2.3.0
>
> Could someone please let me know where is it located. I can as well download the structure from PDB but would like to follow the example for my understanding.
>
> I will appreciate any help in this regard.
>
> Thank you.

Wed, 2009-04-15 14:29
kristiankrantz