Hello -- I'm trying to understand the all-atom energy functions that Rosetta is using, and the best documentation that I have available is:
Protein Structure Prediction Using Rosetta
By Carol A. Rohl, Charlie E. M. Strauss, Kira M. S. Misura, and David Baker
Methods Enzymol. 2004;383:66-93.
Is there any documentation available that is more up-to-date with the source code?