I just got Rosetta 3.2 built on linux and I'm trying to run abinitio for the first time. I am getting this error when I run AbinitioRelax.linuxgccrelease.
ERROR: [ERROR] Unable to open kill_hairpins file
ERROR:: Exit from: src/core/scoring/SS_Killhairpins_Info.cc line: 344
In the command I have "-kill_hairpins 1l2y_.psipred_ss2" but when I search for the file I can't find it. Where should this file be and how do I set-up this command line option to get it to run? I am completely new to Rosetta so maybe this is something stupid/easy, but I can't figure it out. Let me know if you need more information. Thanks for the help.