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Executing the script

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Executing the script

Hello All,

I am currently running RosettaCommons on linux and am attempting to run the script on my native protein.
As of now, I have changed it to an executable file as recommended, but I am unsure what the command is to run this script on a certain pdb.

As of now my command is $ python script path/to/pdb, but this doesnt appear to be correct. Can anyone direct me on what the script requires for a command and exactly what to type in so it runs it on my vinculin.pdb protein.

So for instance, my command would be,$ python home/downloads/vinculin.pdb but this is not working.

Thanks for your help,


Post Situation: 
Fri, 2015-02-20 10:16

Hi, would you like to try:

#For single chain output:
python /home/lanselibai/Cheng/rosetta_2014.30.57114_bundle/tools/protein_tools/scripts/ 4KMT L

#For multiple chain output:
python /home/lanselibai/Cheng/rosetta_2014.30.57114_bundle/tools/protein_tools/scripts/ 4KMT HL

Something maybe useful:

Tue, 2015-02-24 02:36