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Can you change background color of pdb file pictures?

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Can you change background color of pdb file pictures?
#1

In the output of ROSIE docking2 and symmetric_docking jobs,
many pdb files are shown as cartoons with rainbow coloring
and black backgrounds. Is it possible to have an option that
would change the background color of these images to white
and perhaps render these images with a thin black outline
around the cartoon shape? I think this would use less toner
when printing and yield clearer printouts. Also, could you
include these images in the tar archive one gets via the link
"[Download all job files as tar archive]" ?

Thanks!

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Sun, 2015-08-09 01:47
AdoCbl

Fig.6C on p.11 of the article below has a white background and looks fine:
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3149062/figure/pone-0022477-...
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3149062/

Another request is to include the I_sc/RMSD and Score/RMSD plots in the tar archive for a run.

Sun, 2015-08-09 14:22
AdoCbl

Plots images is generated on-the-fly in web browser so thats why they are not includes in tar archive. However: this images generate from score files (included in tar archive) so it is possible to re-plot them if such need arise.

Currently there is no way change plots background.

Tue, 2015-08-11 14:29
Sergey

Thanks for your response, Sergey.

I hope future versions of ROSIE will include the features I requested above.
Is this Forum the best place to post such feature requests?
If not, who should I send them to?

Thanks again!

Tue, 2015-08-18 19:17
AdoCbl