it is normal for cluster.py occupy much space in the swap? I am following this tutorial, I had problems occupy the entire swap, and the program stops running, it increased to 54Gb, and still is using almost entirely.
It is running for more than 22 hours, and apparently will take all of the memory again and crash the program.
the script is:
python /home/jrcf/rosetta/tools/protein_tools/scripts/clustering.py --silent=cluster_all.out --rosetta=/home/jrcf/rosetta/main/source/bin/cluster.linuxgccrelease --database=/home/jrcf/rosetta/main/database/ --options=cluster.options cluster_summary.txt cluster_histogram.txt