##############################################################################################################
#
# Rosetta crash log. Please submit the contents of this file to http://crash.rosettacommons.org/
# or use the script Rosetta/main/source/scripts/python/public/report_crashes.py
#

[START_CRASH_REPORT]
[ROSETTA_VERSION]: 2020.08+release.cb1caba
[COMMIT_DATE]: 2020-02-21T14:46:08.581859
[APPLICATION]: /opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/bin/antibody_designer.mpi.linuxgccrelease
[MODE]: Release
[EXTRAS]: mpi (OpenMPI 1.10.7) 
[OS]: GNU/Linux
[COMPILER]: GCC version "8.3.1 20190311 (Red Hat 8.3.1-3)"
[STDLIB]: libstdc++ version 20190311
[START_OPTIONS]
 -in:file:s=complex_3.pdb -out:overwrite -out:nstruct=1 -run:constant_seed -antibody:design:graft_design_cdrs=H1 -antibody:design:primary_cdrs=H1 -antibody:design:do_dock

[END_OPTIONS]

[START_BACKTRACE]: RAW_LIBC
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libutility.so(utility::save_crash_report(char const*, std::string const&, int)+0x25) [0x7faee352bd25]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libutility.so(utility::signal_handler(int)+0xae) [0x7faee352be4e]
/lib64/libc.so.6(+0x36400) [0x7faee0d3d400]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libcore.3.so(core::scoring::SmoothScoreTermCoeffs::dfunc(double) const+0x29b) [0x7faee6262ceb]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libcore.3.so(core::scoring::SmoothEnvPairPotential::evaluate_env_and_cbeta_deriv(core::pose::Pose const&, core::conformation::Residue const&, numeric::xyzVector<double>&, numeric::xyzVector<double>&, numeric::xyzVector<double>&) const+0x521) [0x7faee6264ce1]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libcore.4.so(+0x4a0609) [0x7faee7b0b609]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libcore.3.so(core::scoring::eval_atom_derivatives_for_minnode(core::scoring::MinimizationNode const&, core::conformation::Residue const&, core::pose::Pose const&, core::scoring::EMapVector const&, utility::vector1<core::scoring::DerivVectorPair, std::allocator<core::scoring::DerivVectorPair> >&)+0xc5) [0x7faee60de905]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libcore.5.so(core::optimization::atom_tree_get_atompairE_deriv(core::pose::Pose&, core::optimization::MinimizerMap&, core::scoring::ScoreFunction const&)+0x82) [0x7faee821f372]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libcore.5.so(core::optimization::atom_tree_dfunc(core::pose::Pose&, core::optimization::MinimizerMap&, core::scoring::ScoreFunction const&, utility::vector1<double, std::allocator<double> > const&, utility::vector1<double, std::allocator<double> >&)+0xbc) [0x7faee821f6ec]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libcore.5.so(core::optimization::AtomTreeMultifunc::dfunc(utility::vector1<double, std::allocator<double> > const&, utility::vector1<double, std::allocator<double> >&) const+0x1eb) [0x7faee823ae1b]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libcore.5.so(core::optimization::Minimizer::lbfgs(utility::vector1<double, std::allocator<double> >&, double&, core::optimization::ConvergenceTest&, std::shared_ptr<core::optimization::LineMinimizationAlgorithm>, int, bool) const+0x765) [0x7faee827f0b5]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libcore.5.so(core::optimization::Minimizer::run(utility::vector1<double, std::allocator<double> >&)+0x17be) [0x7faee8284e1e]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libcore.5.so(core::optimization::AtomTreeMinimizer::run(core::pose::Pose&, core::kinematics::MoveMap const&, core::scoring::ScoreFunction const&, core::optimization::MinimizerOptions const&)+0xa91) [0x7faee822e6b1]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libprotocols.3.so(protocols::minimization_packing::MinMover::inner_run_minimizer(core::pose::Pose&, core::kinematics::MoveMap const&)+0x9e) [0x7faeeb98ed1e]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libprotocols.3.so(protocols::minimization_packing::MinMover::minimize(core::pose::Pose&, core::kinematics::MoveMap const&)+0xd3) [0x7faeeb98eee3]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libprotocols.3.so(protocols::minimization_packing::MinMover::apply(core::pose::Pose&)+0x56a) [0x7faeeb98f7da]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libprotocols_a.5.so(protocols::grafting::CCDEndsGraftMover::apply(core::pose::Pose&)+0x1fdf) [0x7faeed55a6cf]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libprotocols.7.so(protocols::antibody::design::AntibodyDesignMover::run_graft(core::pose::Pose&, core::pose::Pose const&, protocols::antibody::CDRNameEnum, protocols::antibody::clusters::CDRClusterEnum, std::shared_ptr<protocols::grafting::AnchoredGraftMover>)+0x7d) [0x7faef30a50fd]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libprotocols.7.so(protocols::antibody::design::AntibodyDesignMover::apply_to_cdr(core::pose::Pose&, protocols::antibody::CDRNameEnum, unsigned long, bool)+0x31e) [0x7faef30a5a8e]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libprotocols.7.so(protocols::antibody::design::AntibodyDesignMover::run_basic_mc_algorithm(core::pose::Pose&, utility::vector1<protocols::antibody::CDRNameEnum, std::allocator<protocols::antibody::CDRNameEnum> >&, protocols::antibody::design::AntibodyDesignProtocolEnum)+0xdeb) [0x7faef30a940b]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libprotocols.7.so(protocols::antibody::design::AntibodyDesignMover::apply(core::pose::Pose&)+0x37d) [0x7faef30aa90d]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libprotocols.1.so(protocols::jd2::JobDistributor::run_one_job(std::shared_ptr<protocols::moves::Mover>&, long, std::string&, std::string&, unsigned long&, unsigned long&, bool)+0x1dfb) [0x7faee99514bb]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libprotocols.1.so(protocols::jd2::JobDistributor::go_main(std::shared_ptr<protocols::moves::Mover>)+0x1b2) [0x7faee99523c2]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libprotocols.1.so(protocols::jd2::FileSystemJobDistributor::go(std::shared_ptr<protocols::moves::Mover>)+0x47) [0x7faee993a4d7]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/bin/antibody_designer.mpi.linuxgccrelease() [0x4024e2]
/lib64/libc.so.6(__libc_start_main+0xf5) [0x7faee0d29555]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/bin/antibody_designer.mpi.linuxgccrelease() [0x40267e]

[END_BACKTRACE]

[FILE]: SIGSEGV
[LINE]: 11
[START_MESSAGE]
Segmentation Fault

[END_MESSAGE]
[END_CRASH_REPORT]

##############################################################################################################
#
# Rosetta crash log. Please submit the contents of this file to http://crash.rosettacommons.org/
# or use the script Rosetta/main/source/scripts/python/public/report_crashes.py
#

[START_CRASH_REPORT]
[ROSETTA_VERSION]: 2020.08+release.cb1caba
[COMMIT_DATE]: 2020-02-21T14:46:08.581859
[APPLICATION]: /opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/bin/antibody_designer.mpi.linuxgccrelease
[MODE]: Release
[EXTRAS]: mpi (OpenMPI 1.10.7) 
[OS]: GNU/Linux
[COMPILER]: GCC version "8.3.1 20190311 (Red Hat 8.3.1-3)"
[STDLIB]: libstdc++ version 20190311
[START_OPTIONS]
 -in:file:s=complex_3.pdb -out:overwrite -out:nstruct=1 -run:constant_seed -antibody:design:graft_design_cdrs=H1 -antibody:design:primary_cdrs=H1 -antibody:design:do_dock

[END_OPTIONS]

[START_BACKTRACE]: RAW_LIBC
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libutility.so(utility::save_crash_report(char const*, std::string const&, int)+0x25) [0x7f7f19a97d25]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libutility.so(utility::signal_handler(int)+0xae) [0x7f7f19a97e4e]
/lib64/libc.so.6(+0x36400) [0x7f7f172a9400]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libcore.3.so(core::scoring::SmoothScoreTermCoeffs::dfunc(double) const+0x29b) [0x7f7f1c7ceceb]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libcore.3.so(core::scoring::SmoothEnvPairPotential::evaluate_env_and_cbeta_deriv(core::pose::Pose const&, core::conformation::Residue const&, numeric::xyzVector<double>&, numeric::xyzVector<double>&, numeric::xyzVector<double>&) const+0x521) [0x7f7f1c7d0ce1]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libcore.4.so(+0x4a0609) [0x7f7f1e077609]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libcore.3.so(core::scoring::eval_atom_derivatives_for_minnode(core::scoring::MinimizationNode const&, core::conformation::Residue const&, core::pose::Pose const&, core::scoring::EMapVector const&, utility::vector1<core::scoring::DerivVectorPair, std::allocator<core::scoring::DerivVectorPair> >&)+0xc5) [0x7f7f1c64a905]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libcore.5.so(core::optimization::atom_tree_get_atompairE_deriv(core::pose::Pose&, core::optimization::MinimizerMap&, core::scoring::ScoreFunction const&)+0x82) [0x7f7f1e78b372]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libcore.5.so(core::optimization::atom_tree_dfunc(core::pose::Pose&, core::optimization::MinimizerMap&, core::scoring::ScoreFunction const&, utility::vector1<double, std::allocator<double> > const&, utility::vector1<double, std::allocator<double> >&)+0xbc) [0x7f7f1e78b6ec]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libcore.5.so(core::optimization::AtomTreeMultifunc::dfunc(utility::vector1<double, std::allocator<double> > const&, utility::vector1<double, std::allocator<double> >&) const+0x1eb) [0x7f7f1e7a6e1b]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libcore.5.so(core::optimization::Minimizer::lbfgs(utility::vector1<double, std::allocator<double> >&, double&, core::optimization::ConvergenceTest&, std::shared_ptr<core::optimization::LineMinimizationAlgorithm>, int, bool) const+0x765) [0x7f7f1e7eb0b5]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libcore.5.so(core::optimization::Minimizer::run(utility::vector1<double, std::allocator<double> >&)+0x17be) [0x7f7f1e7f0e1e]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libcore.5.so(core::optimization::AtomTreeMinimizer::run(core::pose::Pose&, core::kinematics::MoveMap const&, core::scoring::ScoreFunction const&, core::optimization::MinimizerOptions const&)+0xa91) [0x7f7f1e79a6b1]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libprotocols.3.so(protocols::minimization_packing::MinMover::inner_run_minimizer(core::pose::Pose&, core::kinematics::MoveMap const&)+0x9e) [0x7f7f21efad1e]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libprotocols.3.so(protocols::minimization_packing::MinMover::minimize(core::pose::Pose&, core::kinematics::MoveMap const&)+0xd3) [0x7f7f21efaee3]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libprotocols.3.so(protocols::minimization_packing::MinMover::apply(core::pose::Pose&)+0x56a) [0x7f7f21efb7da]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libprotocols_a.5.so(protocols::grafting::CCDEndsGraftMover::apply(core::pose::Pose&)+0x1fdf) [0x7f7f23ac66cf]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libprotocols.7.so(protocols::antibody::design::AntibodyDesignMover::run_graft(core::pose::Pose&, core::pose::Pose const&, protocols::antibody::CDRNameEnum, protocols::antibody::clusters::CDRClusterEnum, std::shared_ptr<protocols::grafting::AnchoredGraftMover>)+0x7d) [0x7f7f296110fd]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libprotocols.7.so(protocols::antibody::design::AntibodyDesignMover::apply_to_cdr(core::pose::Pose&, protocols::antibody::CDRNameEnum, unsigned long, bool)+0x31e) [0x7f7f29611a8e]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libprotocols.7.so(protocols::antibody::design::AntibodyDesignMover::run_basic_mc_algorithm(core::pose::Pose&, utility::vector1<protocols::antibody::CDRNameEnum, std::allocator<protocols::antibody::CDRNameEnum> >&, protocols::antibody::design::AntibodyDesignProtocolEnum)+0xdeb) [0x7f7f2961540b]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libprotocols.7.so(protocols::antibody::design::AntibodyDesignMover::apply(core::pose::Pose&)+0x37d) [0x7f7f2961690d]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libprotocols.1.so(protocols::jd2::JobDistributor::run_one_job(std::shared_ptr<protocols::moves::Mover>&, long, std::string&, std::string&, unsigned long&, unsigned long&, bool)+0x1dfb) [0x7f7f1febd4bb]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libprotocols.1.so(protocols::jd2::JobDistributor::go_main(std::shared_ptr<protocols::moves::Mover>)+0x1b2) [0x7f7f1febe3c2]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/8/mpi/libprotocols.1.so(protocols::jd2::FileSystemJobDistributor::go(std::shared_ptr<protocols::moves::Mover>)+0x47) [0x7f7f1fea64d7]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/bin/antibody_designer.mpi.linuxgccrelease() [0x4024e2]
/lib64/libc.so.6(__libc_start_main+0xf5) [0x7f7f17295555]
/opt/rosetta_bin_linux_2020.08.61146_bundle/main/source/bin/antibody_designer.mpi.linuxgccrelease() [0x40267e]

[END_BACKTRACE]

[FILE]: SIGSEGV
[LINE]: 11
[START_MESSAGE]
Segmentation Fault

[END_MESSAGE]
[END_CRASH_REPORT]