############################################################################################################## # # Rosetta crash log. # [START_CRASH_REPORT] [ROSETTA_VERSION]: 2019.35+release.767c1ea25c5 [COMMIT_DATE]: 2019-08-31T05:00:04.827710 [APPLICATION]: /Applications/rosetta_bin_mac_2019.35.60890_bundle/main/source/bin/rosetta_scripts.static.macosclangrelease [MODE]: Release [EXTRAS]: default [OS]: Apple Mac OS X [COMPILER]: Clang version "9.0.0 (clang-900.0.39.2)" [STDLIB]: libc++ version 4000 [START_OPTIONS] -in:ignore_unrecognized_res -in:file:s=200ns1-101_AB.pdb -in:file:native=200ns1-101_AB.pdb -in:file:fullatom -out:nstruct=1000 -out:file:silent=bin_struct.o -parser:protocol=updated2-notree.xml -jd2:ntrials=1 -packing:extrachi_cutoff=5 -packing:linmem_ig=10 -packing:ex1 -packing:ex2 -corrections:restore_talaris_behavior -docking:no_filters [END_OPTIONS] [START_BACKTRACE]: RAW_LIBC 1 rosetta_scripts.static.macosclangrelease 0x000000010f3cc1c5 utility::signal_handler(int) + 309 2 libsystem_platform.dylib 0x00007fff7eb92b5d _sigtramp + 29 3 ??? 0x0000000000000020 0x0 + 32 4 rosetta_scripts.static.macosclangrelease 0x000000010ed61340 core::conformation::Conformation::xyz(core::id::AtomID const&) const + 16 5 rosetta_scripts.static.macosclangrelease 0x000000010dfe04fd core::pose::Pose::xyz(core::id::AtomID const&) const + 13 6 rosetta_scripts.static.macosclangrelease 0x000000010e1e6c0b core::scoring::rms_at_corresponding_atoms_no_super(core::pose::Pose const&, core::pose::Pose const&, std::__1::map, std::__1::allocator > > const&, utility::vector1 > const&) + 523 7 rosetta_scripts.static.macosclangrelease 0x000000010e1e6980 core::scoring::rms_at_corresponding_atoms_no_super(core::pose::Pose const&, core::pose::Pose const&, std::__1::map, std::__1::allocator > > const&) + 176 8 rosetta_scripts.static.macosclangrelease 0x000000010ea8d189 core::simple_metrics::metrics::RMSDMetric::calculate(core::pose::Pose const&) const + 409 9 rosetta_scripts.static.macosclangrelease 0x000000010eb68bdf core::simple_metrics::RealMetric::apply(core::pose::Pose&, std::__1::basic_string, std::__1::allocator >, std::__1::basic_string, std::__1::allocator >, bool) const + 239 10 rosetta_scripts.static.macosclangrelease 0x000000010cd6116c protocols::analysis::simple_metrics::RunSimpleMetricsMover::apply(core::pose::Pose&) + 540 11 rosetta_scripts.static.macosclangrelease 0x000000010d8a1124 protocols::rosetta_scripts::ParsedProtocol::apply_mover(core::pose::Pose&, protocols::rosetta_scripts::ParsedProtocol::MoverFilterPair const&) + 1220 12 rosetta_scripts.static.macosclangrelease 0x000000010d89b4e2 protocols::rosetta_scripts::ParsedProtocol::apply(core::pose::Pose&) + 1202 13 rosetta_scripts.static.macosclangrelease 0x000000010d914c63 protocols::jd2::JobDistributor::run_one_job(std::__1::shared_ptr&, long, std::__1::basic_string, std::__1::allocator >&, std::__1::basic_string, std::__1::allocator >&, unsigned long&, unsigned long&, bool) + 6851 14 rosetta_scripts.static.macosclangrelease 0x000000010d912613 protocols::jd2::JobDistributor::go_main(std::__1::shared_ptr) + 195 15 rosetta_scripts.static.macosclangrelease 0x000000010d90de42 protocols::jd2::FileSystemJobDistributor::go(std::__1::shared_ptr) + 66 16 rosetta_scripts.static.macosclangrelease 0x000000010b80bbbd main + 1149 17 libdyld.dylib 0x00007fff7e9a73d5 start + 1 [END_BACKTRACE] [FILE]: SIGSEGV [LINE]: 11 [START_MESSAGE] Segmentation Fault [END_MESSAGE] [END_CRASH_REPORT]