##############################################################################################################
#
# Rosetta crash log. Please submit the contents of this file to http://crash.rosettacommons.org/
# or use the script Rosetta/main/source/scripts/python/public/report_crashes.py
#

[START_CRASH_REPORT]
[ROSETTA_VERSION]: 2021.16+release.8ee4f02
[COMMIT_DATE]: 2021-04-20T20:57:38.289184
[APPLICATION]: /home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/bin/rosetta_scripts.tensorflow_gpu.linuxgccrelease
[MODE]: Release
[EXTRAS]: tensorflow_gpu 
[OS]: GNU/Linux
[COMPILER]: GCC version "7.5.0"
[STDLIB]: libstdc++ version 20191114
[START_OPTIONS]
 -in:path:database=/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/database/ -in:file:fasta=/common/compchem/kwei/projects/E3/ZER1/cm_manual/Zer1A.fasta -out:overwrite -out:nstruct=1 -parser:protocol=rosetta_cm.xml -corrections:beta_cart -optimization:default_max_cycles=200 -cm:hybridize:stage1_probability=1 -relax:dualspace -relax:jump_move

[END_OPTIONS]

[START_BACKTRACE]: RAW_LIBC
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/tensorflow_gpu/libutility.so(utility::save_crash_report(char const*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, int)+0x33) [0x7f5224687723]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/tensorflow_gpu/libutility.so(utility::signal_handler(int)+0xe4) [0x7f5224687874]
/lib/x86_64-linux-gnu/libc.so.6(+0x3f040) [0x7f5224136040]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/tensorflow_gpu/libcore.3.so(core::scoring::SmoothScoreTermCoeffs::dfunc(double) const+0xd1) [0x7f521c1870c1]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/tensorflow_gpu/libcore.3.so(core::scoring::SmoothEnvPairPotential::evaluate_env_and_cbeta_deriv(core::pose::Pose const&, core::conformation::Residue const&, numeric::xyzVector<double>&, numeric::xyzVector<double>&, numeric::xyzVector<double>&) const+0x5a1) [0x7f521c1892a1]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/tensorflow_gpu/libcore.4.so(+0x496109) [0x7f521dac3109]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/tensorflow_gpu/libcore.3.so(core::scoring::eval_atom_derivatives_for_minnode(core::scoring::MinimizationNode const&, core::conformation::Residue const&, core::pose::Pose const&, core::scoring::EMapVector const&, utility::vector1<core::scoring::DerivVectorPair, std::allocator<core::scoring::DerivVectorPair> >&)+0xd0) [0x7f521bff4510]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/tensorflow_gpu/libcore.5.so(core::optimization::cartesian_collect_atompairE_deriv(core::pose::Pose&, core::optimization::CartesianMinimizerMap&, core::scoring::ScoreFunction const&, utility::vector1<double, std::allocator<double> >&, double)+0xc0) [0x7f521e16b6d0]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/tensorflow_gpu/libcore.5.so(core::optimization::cartesian_dfunc(core::pose::Pose&, core::optimization::CartesianMinimizerMap&, core::scoring::ScoreFunction const&, utility::vector1<double, std::allocator<double> > const&, utility::vector1<double, std::allocator<double> >&)+0x12a) [0x7f521e16bd1a]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/tensorflow_gpu/libcore.5.so(core::optimization::CartesianMultifunc::dfunc(utility::vector1<double, std::allocator<double> > const&, utility::vector1<double, std::allocator<double> >&) const+0x241) [0x7f521e18d791]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/tensorflow_gpu/libcore.5.so(core::optimization::Minimizer::run(utility::vector1<double, std::allocator<double> >&)+0x2d8) [0x7f521e1b8c28]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/tensorflow_gpu/libcore.5.so(core::optimization::CartesianMinimizer::run(core::pose::Pose&, core::kinematics::MoveMap const&, core::scoring::ScoreFunction const&, core::optimization::MinimizerOptions const&)+0x1cd2) [0x7f521e1764b2]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/tensorflow_gpu/libprotocols_b.6.so(protocols::hybridization::CartesianHybridize::apply(core::pose::Pose&)+0x1e01) [0x7f5226555a11]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/tensorflow_gpu/libprotocols_b.6.so(protocols::hybridization::HybridizeProtocol::apply(core::pose::Pose&)+0x4cf0) [0x7f52265f3240]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/tensorflow_gpu/libprotocols.1.so(protocols::rosetta_scripts::ParsedProtocol::apply_mover(core::pose::Pose&, protocols::rosetta_scripts::ParsedProtocol::ParsedProtocolStep const&)+0x22a) [0x7f5225c7b7ca]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/tensorflow_gpu/libprotocols.1.so(protocols::rosetta_scripts::ParsedProtocol::apply_step(core::pose::Pose&, protocols::rosetta_scripts::ParsedProtocol::ParsedProtocolStep const&, bool)+0x1a) [0x7f5225c7bc6a]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/tensorflow_gpu/libprotocols.1.so(protocols::rosetta_scripts::ParsedProtocol::sequence_protocol(core::pose::Pose&, __gnu_cxx::__normal_iterator<protocols::rosetta_scripts::ParsedProtocol::ParsedProtocolStep const*, std::vector<protocols::rosetta_scripts::ParsedProtocol::ParsedProtocolStep, std::allocator<protocols::rosetta_scripts::ParsedProtocol::ParsedProtocolStep> > >)+0x40) [0x7f5225c7c390]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/tensorflow_gpu/libprotocols.1.so(protocols::rosetta_scripts::ParsedProtocol::apply(core::pose::Pose&)+0x1f6) [0x7f5225c7ce26]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/tensorflow_gpu/libprotocols.1.so(protocols::jd2::JobDistributor::run_one_job(std::shared_ptr<protocols::moves::Mover>&, long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, unsigned long&, unsigned long&, bool)+0xd6e) [0x7f52257c3f2e]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/tensorflow_gpu/libprotocols.1.so(protocols::jd2::JobDistributor::go_main(std::shared_ptr<protocols::moves::Mover>)+0x1bb) [0x7f52257c5c5b]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/tensorflow_gpu/libprotocols.1.so(protocols::jd2::FileSystemJobDistributor::go(std::shared_ptr<protocols::moves::Mover>)+0x56) [0x7f52257abd96]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/bin/rosetta_scripts.tensorflow_gpu.linuxgccrelease(+0x44c7) [0x559af89ad4c7]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xe7) [0x7f5224118bf7]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/bin/rosetta_scripts.tensorflow_gpu.linuxgccrelease(+0x489a) [0x559af89ad89a]

[END_BACKTRACE]

[FILE]: SIGSEGV
[LINE]: 11
[START_MESSAGE]
Segmentation Fault

[END_MESSAGE]
[END_CRASH_REPORT]

##############################################################################################################
#
# Rosetta crash log. Please submit the contents of this file to http://crash.rosettacommons.org/
# or use the script Rosetta/main/source/scripts/python/public/report_crashes.py
#

[START_CRASH_REPORT]
[ROSETTA_VERSION]: 2021.16+release.8ee4f02
[COMMIT_DATE]: 2021-04-20T20:57:38.289184
[APPLICATION]: /home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/bin/rosetta_scripts.default.linuxgccrelease
[MODE]: Release
[EXTRAS]: default
[OS]: GNU/Linux
[COMPILER]: GCC version "7.5.0"
[STDLIB]: libstdc++ version 20191114
[START_OPTIONS]
 -in:path:database=/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/database/ -in:file:fasta=/common/compchem/kwei/projects/E3/ZER1/cm_manual/Zer1A.fasta -out:overwrite -out:nstruct=1 -parser:protocol=rosetta_cm.xml -corrections:beta_cart -optimization:default_max_cycles=200 -cm:hybridize:stage1_probability=1 -relax:dualspace -relax:jump_move

[END_OPTIONS]

[START_BACKTRACE]: RAW_LIBC
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/default/libutility.so(utility::save_crash_report(char const*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, int)+0x33) [0x7f25b6bcb643]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/default/libutility.so(utility::signal_handler(int)+0xe4) [0x7f25b6bcb794]
/lib/x86_64-linux-gnu/libc.so.6(+0x3f040) [0x7f25b667a040]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/default/libcore.3.so(core::scoring::SmoothScoreTermCoeffs::dfunc(double) const+0x18e) [0x7f25ae6ea16e]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/default/libcore.3.so(core::scoring::SmoothEnvPairPotential::evaluate_env_and_cbeta_deriv(core::pose::Pose const&, core::conformation::Residue const&, numeric::xyzVector<double>&, numeric::xyzVector<double>&, numeric::xyzVector<double>&) const+0x5a1) [0x7f25ae6ec291]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/default/libcore.4.so(+0x4960f9) [0x7f25b00260f9]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/default/libcore.3.so(core::scoring::eval_atom_derivatives_for_minnode(core::scoring::MinimizationNode const&, core::conformation::Residue const&, core::pose::Pose const&, core::scoring::EMapVector const&, utility::vector1<core::scoring::DerivVectorPair, std::allocator<core::scoring::DerivVectorPair> >&)+0xd0) [0x7f25ae557500]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/default/libcore.5.so(core::optimization::cartesian_collect_atompairE_deriv(core::pose::Pose&, core::optimization::CartesianMinimizerMap&, core::scoring::ScoreFunction const&, utility::vector1<double, std::allocator<double> >&, double)+0xc0) [0x7f25b06cc230]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/default/libcore.5.so(core::optimization::cartesian_dfunc(core::pose::Pose&, core::optimization::CartesianMinimizerMap&, core::scoring::ScoreFunction const&, utility::vector1<double, std::allocator<double> > const&, utility::vector1<double, std::allocator<double> >&)+0x12a) [0x7f25b06cc87a]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/default/libcore.5.so(core::optimization::CartesianMultifunc::dfunc(utility::vector1<double, std::allocator<double> > const&, utility::vector1<double, std::allocator<double> >&) const+0x241) [0x7f25b06ee2f1]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/default/libcore.5.so(core::optimization::Minimizer::run(utility::vector1<double, std::allocator<double> >&)+0x2d8) [0x7f25b0719788]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/default/libcore.5.so(core::optimization::CartesianMinimizer::run(core::pose::Pose&, core::kinematics::MoveMap const&, core::scoring::ScoreFunction const&, core::optimization::MinimizerOptions const&)+0x1cd2) [0x7f25b06d7012]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/default/libprotocols_b.6.so(protocols::hybridization::CartesianHybridize::apply(core::pose::Pose&)+0x1e01) [0x7f25b8a85b21]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/default/libprotocols_b.6.so(protocols::hybridization::HybridizeProtocol::apply(core::pose::Pose&)+0x4cf0) [0x7f25b8b23350]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/default/libprotocols.1.so(protocols::rosetta_scripts::ParsedProtocol::apply_mover(core::pose::Pose&, protocols::rosetta_scripts::ParsedProtocol::ParsedProtocolStep const&)+0x22a) [0x7f25b81b67ca]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/default/libprotocols.1.so(protocols::rosetta_scripts::ParsedProtocol::apply_step(core::pose::Pose&, protocols::rosetta_scripts::ParsedProtocol::ParsedProtocolStep const&, bool)+0x1a) [0x7f25b81b6c6a]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/default/libprotocols.1.so(protocols::rosetta_scripts::ParsedProtocol::sequence_protocol(core::pose::Pose&, __gnu_cxx::__normal_iterator<protocols::rosetta_scripts::ParsedProtocol::ParsedProtocolStep const*, std::vector<protocols::rosetta_scripts::ParsedProtocol::ParsedProtocolStep, std::allocator<protocols::rosetta_scripts::ParsedProtocol::ParsedProtocolStep> > >)+0x40) [0x7f25b81b7390]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/default/libprotocols.1.so(protocols::rosetta_scripts::ParsedProtocol::apply(core::pose::Pose&)+0x1f6) [0x7f25b81b7e26]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/default/libprotocols.1.so(protocols::jd2::JobDistributor::run_one_job(std::shared_ptr<protocols::moves::Mover>&, long, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&, unsigned long&, unsigned long&, bool)+0xd6e) [0x7f25b7cfef2e]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/default/libprotocols.1.so(protocols::jd2::JobDistributor::go_main(std::shared_ptr<protocols::moves::Mover>)+0x1bb) [0x7f25b7d00c5b]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/5.4/64/x86/gcc/7/default/libprotocols.1.so(protocols::jd2::FileSystemJobDistributor::go(std::shared_ptr<protocols::moves::Mover>)+0x56) [0x7f25b7ce6d96]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/bin/rosetta_scripts.default.linuxgccrelease(+0x44c7) [0x561c12bd24c7]
/lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xe7) [0x7f25b665cbf7]
/home/kwei/bin/Rosetta/rosetta_src_2021.16.61629_bundle/rosetta_src_2021.16.61629_bundle/main/source/bin/rosetta_scripts.default.linuxgccrelease(+0x489a) [0x561c12bd289a]

[END_BACKTRACE]

[FILE]: SIGSEGV
[LINE]: 11
[START_MESSAGE]
Segmentation Fault

[END_MESSAGE]
[END_CRASH_REPORT]