##############################################################################################################
#
# Rosetta crash log. Please submit the contents of this file to http://crash.rosettacommons.org/
# or use the script Rosetta/main/source/scripts/python/public/report_crashes.py
#

[START_CRASH_REPORT]
[ROSETTA_VERSION]: 2021.16+release.8ee4f02
[COMMIT_DATE]: 2021-04-20T20:52:25.363712
[APPLICATION]: /home/jacob/software/rosetta_bin_linux_2021.16.61629_bundle/main/source/bin/CstfileToTheozymePDB.static.linuxgccrelease
[MODE]: Release
[EXTRAS]: default
[OS]: GNU/Linux
[COMPILER]: GCC version "4.8.5 20150623 (Red Hat 4.8.5-39)"
[STDLIB]: libstdc++ version 20150623
[START_OPTIONS]
 -in:path:database=/home/jacob/software/rosetta_bin_linux_2021.16.61629_bundle/main/database/ -in:file:extra_res_fa=NYL.params -match:geometric_constraint_file=RD-2.cst -match:dynamic_grid_refinement

[END_OPTIONS]

[START_BACKTRACE]: RAW_LIBC
[0x63c7e10]
[0x63c6b93]
[0x6471d16]
[0x4f3e686]
[0x4f409c3]
[0x4f43b40]
[0x4f43fe3]
[0x312273d]
[0x65199a]
[0x4194bb]
[0x6be9624]
[0x6be98a1]
[0x651546]

[END_BACKTRACE]

[FILE]: src/core/io/pdb/pdb_writer.cc
[LINE]: 616
[START_MESSAGE]
[ ERROR ] UtilityExitException
ERROR: Assertion `serial_to_serial_with_ter.count(ai.connected_indices[ c_index ] )` failed.



[END_MESSAGE]
[END_CRASH_REPORT]