############################################################################################################## # # Rosetta crash log. Please submit the contents of this file to http://crash.rosettacommons.org/ # or use the script Rosetta/main/source/scripts/python/public/report_crashes.py # [START_CRASH_REPORT] [ROSETTA_VERSION]: 2021.16+release.8ee4f02 [COMMIT_DATE]: 2021-04-20T20:57:38.289184 [APPLICATION]: match.linuxgccrelease [MODE]: Release [EXTRAS]: default [OS]: GNU/Linux [COMPILER]: GCC version "7.4.0" [STDLIB]: libstdc++ version 20181206 [START_OPTIONS] -in:ignore_unrecognized_res -in:file:s=enz_relax/novo_relaxed.pdb -in:file:extra_res_fa=substrate_params/sah.params substrate_params/linjiaji.params -in:file:load_PDB_components=false -run:ignore_zero_occupancy -packing:ex1 -packing:ex2 -match:lig_name=LIN -match:geometric_constraint_file=constraint/linjiaji.cst -match:scaffold_active_site_residues=novo.pos [END_OPTIONS] [START_BACKTRACE]: RAW_LIBC /public/home/ademonliu/apps/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/7.4/default/libutility.so(backtrace_string[abi:cxx11](int)+0x43) [0x2b3c31eadce3] /public/home/ademonliu/apps/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/7.4/default/libutility.so(utility::excn::Exception::Exception(char const*, int, std::__cxx11::basic_string, std::allocator > const&)+0xd3) [0x2b3c31ef02c3] /public/home/ademonliu/apps/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/7.4/default/libutility.so(utility::UtilityExitException::UtilityExitException(char const*, int, std::__cxx11::basic_string, std::allocator > const&)+0xfb) [0x2b3c31eb35fb] /public/home/ademonliu/apps/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/7.4/default/libutility.so(utility::exit(char const*, int, std::__cxx11::basic_string, std::allocator > const&, int)+0x36) [0x2b3c31eb3256] /public/home/ademonliu/apps/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/7.4/default/libprotocols.7.so(protocols::match::upstream::ProteinUpstreamBuilder::initialize_rescoords(unsigned long, core::conformation::Residue&, protocols::match::upstream::ScaffoldBuildPoint const&) const+0x781) [0x2b3c227f1ae1] /public/home/ademonliu/apps/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/7.4/default/libprotocols.7.so(protocols::match::upstream::ProteinUpstreamBuilder::build[abi:cxx11](protocols::match::upstream::ScaffoldBuildPoint const&) const+0x28e) [0x2b3c227f6dae] /public/home/ademonliu/apps/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/7.4/default/libprotocols.7.so(protocols::match::downstream::DownstreamAlgorithm::default_build_hits_at_all_positions[abi:cxx11](protocols::match::Matcher const&) const+0x104) [0x2b3c227475b4] /public/home/ademonliu/apps/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/7.4/default/libprotocols.7.so(protocols::match::downstream::ClassicMatchAlgorithm::build_hits_at_all_positions[abi:cxx11](protocols::match::Matcher&)+0x1c6) [0x2b3c22741016] /public/home/ademonliu/apps/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/7.4/default/libprotocols.7.so(protocols::match::Matcher::generate_hits_for_constraint(unsigned long)+0x38) [0x2b3c226c31d8] /public/home/ademonliu/apps/rosetta_src_2021.16.61629_bundle/main/source/build/src/release/linux/3.10/64/x86/gcc/7.4/default/libprotocols.7.so(protocols::match::Matcher::generate_hits()+0x43) [0x2b3c226c70c3] match.linuxgccrelease() [0x405ac8] match.linuxgccrelease() [0x404b6b] /lib64/libc.so.6(__libc_start_main+0xf5) [0x2b3c348ff445] match.linuxgccrelease() [0x404bc9] [END_BACKTRACE] [FILE]: src/protocols/match/upstream/ProteinUpstreamBuilder.cc [LINE]: 1210 [START_MESSAGE] [ ERROR ] UtilityExitException ERROR: Assertion `build_sets_[ build_set_id ].restype().has( "1HA" )` failed. [END_MESSAGE] [END_CRASH_REPORT]