Removing old self-test-dir self-test/... Checking [52] targets: ['3HZM', '3NH7', '3GO1', '3GGW', '3L5X', '3MLY', '3I02', '3L5Y', '3GBN', '3GHE', '3INU', '3JUY', '2VXV', '2VXT', '3IDX', '3IFO', '3IFN', '3HC3', '3IJH', '3L1O', '3IET', '3LEY', '3MXW', '3GK8', '3HC4', '2UYL', '3HNT', '3GJF', '3O41', '3GNM', '3GI9', '3G5Y', '3GKW', '3LZF', '3L95', '2XRA', '3HR5', '2BRR', '3K2U', '3O0R', '3IXT', '3KR3', '3G04', '3I9G', '3I2C', '3MLW', '2XTJ', '3AAZ', '3H42', '3LD8', '3GIZ', '3HI6']... Testing target: 3HZM... light_chain: DIVMTQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYNLRTFGGGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKSIAVKWKIDGSERQNGVLNSWTDQDKKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC heavy_chain: EVKLVESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLAFIRNKAKGYTTEYSSSVKGRFTISRDNSQSFLYLQMNTLRAEDSATYYCARDINPGSDGYYDALDYWGQGTSVTVSRAKTTPPSVYPLAPGSAAQNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR L1 detected: KSSQSLLNSRTRKNYLA ( 17 residues ) L3 detected: KQSYNLRT ( 8 residues ) L2 detected: WASTRES ( 7 residues ) FR_L1: DIVMTQSPSSLAVSAGEKVTMSC FR_L2: WYQQKPGQSPKLLIY FR_L3: GVPDRFTGSGSGTDFTLTISSVQAEDLAVYYC FR_L4: FGGGTKLELKRA L segments: DIVMTQSPSSLAVSAGEKVTMSC KSSQSLLNSRTRKNYLA WYQQKPGQSPKLLIY WASTRES GVPDRFTGSGSGTDFTLTISSVQAEDLAVYYC KQSYNLRT FGGGTKLELKRA H1 detected: GFTFTDYYMS ( 10 residues ) H3 detected: DINPGSDGYYDALDY ( 15 residues ) H2 detected: FIRNKAKGYTTEYSSSVKG ( 19 residues ) FR_H1: EVKLVESGGGLVQSGGSLRLSCATS FR_H2: WVRQPPGKALEWLA FR_H3: RFTISRDNSQSFLYLQMNTLRAEDSATYYCAR FR_H4: WGQGTSVTVSRA H segments: EVKLVESGGGLVQSGGSLRLSCATS GFTFTDYYMS WVRQPPGKALEWLA FIRNKAKGYTTEYSSSVKG RFTISRDNSQSFLYLQMNTLRAEDSATYYCAR DINPGSDGYYDALDY WGQGTSVTVSRA CDR: { "FR_H1": "EVKLVESGGGLVQSGGSLRLSCATS", "FR_H2": "WVRQPPGKALEWLA", "FR_H3": "RFTISRDNSQSFLYLQMNTLRAEDSATYYCAR", "FR_H4": "WGQGTSVTVSRA", "FR_L1": "DIVMTQSPSSLAVSAGEKVTMSC", "FR_L2": "WYQQKPGQSPKLLIY", "FR_L3": "GVPDRFTGSGSGTDFTLTISSVQAEDLAVYYC", "FR_L4": "FGGGTKLELKRA", "H1": "GFTFTDYYMS", "H2": "FIRNKAKGYTTEYSSSVKG", "H3": "DINPGSDGYYDALDY", "L1": "KSSQSLLNSRTRKNYLA", "L2": "WASTRES", "L3": "KQSYNLRT" } FRH: OK FRL: OK H1: OK H2: OK H3: OK L1: OK L2: OK L3: OK heavy: OK light: OK numbering_H: OK numbering_L: OK Testing target: 3HZM... OK Testing target: 3NH7... light_chain: DIELTQPPSVSVAPGQTARISCSGDSLGSKYVIWYQQKPGQAPVLVIYDDSNRPSGIPERFSGSNSGNTATLTISGTQAEDEADYYCSTFTMSGNGTVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEA heavy_chain: QVQLVESGGGLVQPGGSLRLSCAASGFTFSNYTLNWVRQAPGKGLEWVSYTSSSGSLTGYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARERWHVRGYFDHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSEFSAWSHPQFEK L1 detected: SGDSLGSKYVI ( 11 residues ) L3 detected: STFTMSGNGTV ( 11 residues ) L2 detected: DDSNRPS ( 7 residues ) FR_L1: DIELTQPPSVSVAPGQTARISC FR_L2: WYQQKPGQAPVLVIY FR_L3: GIPERFSGSNSGNTATLTISGTQAEDEADYYC FR_L4: FGGGTKLTVLGQ L segments: DIELTQPPSVSVAPGQTARISC SGDSLGSKYVI WYQQKPGQAPVLVIY DDSNRPS GIPERFSGSNSGNTATLTISGTQAEDEADYYC STFTMSGNGTV FGGGTKLTVLGQ H1 detected: GFTFSNYTLN ( 10 residues ) H3 detected: ERWHVRGYFDH ( 11 residues ) H2 detected: YTSSSGSLTGYADSVKG ( 17 residues ) FR_H1: QVQLVESGGGLVQPGGSLRLSCAAS FR_H2: WVRQAPGKGLEWVS FR_H3: RFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR FR_H4: WGQGTLVTVSSA H segments: QVQLVESGGGLVQPGGSLRLSCAAS GFTFSNYTLN WVRQAPGKGLEWVS YTSSSGSLTGYADSVKG RFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR ERWHVRGYFDH WGQGTLVTVSSA CDR: { "FR_H1": "QVQLVESGGGLVQPGGSLRLSCAAS", "FR_H2": "WVRQAPGKGLEWVS", "FR_H3": "RFTISRDNSKNTLYLQMNSLRAEDTAVYYCAR", "FR_H4": "WGQGTLVTVSSA", "FR_L1": "DIELTQPPSVSVAPGQTARISC", "FR_L2": "WYQQKPGQAPVLVIY", "FR_L3": "GIPERFSGSNSGNTATLTISGTQAEDEADYYC", "FR_L4": "FGGGTKLTVLGQ", "H1": "GFTFSNYTLN", "H2": "YTSSSGSLTGYADSVKG", "H3": "ERWHVRGYFDH", "L1": "SGDSLGSKYVI", "L2": "DDSNRPS", "L3": "STFTMSGNGTV" } FRH: OK FRL: OK H1: OK H2: OK H3: OK L1: OK L2: OK L3: OK heavy: OK light: OK numbering_H: OK numbering_L: OK Testing target: 3NH7... OK Testing target: 3GO1... light_chain: SYVLTQPPSVSVSPGQTARITCSAEALSNQYAYWYRQRPGQAPLLIIYKDTKRPSGIPERFSGSTSGTTVTLTISGVQAEDEADYYCQSADSSGDYVFGGGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP heavy_chain: EVQLQESGPGLVKPSETLSLTCTVSGGPINNAYWTWIRQPPGKGLEYLGYVYHTGVTNYNPSLKSRLTITIDTSRKQLSLSLKFVTAADSAVYYCAREWAEDGDFGNAFHVWGQGTMVAVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP L1 detected: SAEALSNQYAY ( 11 residues ) L3 detected: QSADSSGDYV ( 10 residues ) L2 detected: KDTKRPS ( 7 residues ) FR_L1: SYVLTQPPSVSVSPGQTARITC FR_L2: WYRQRPGQAPLLIIY FR_L3: GIPERFSGSTSGTTVTLTISGVQAEDEADYYC FR_L4: FGGGTKVTVLGQ L segments: SYVLTQPPSVSVSPGQTARITC SAEALSNQYAY WYRQRPGQAPLLIIY KDTKRPS GIPERFSGSTSGTTVTLTISGVQAEDEADYYC QSADSSGDYV FGGGTKVTVLGQ H1 detected: GGPINNAYWT ( 10 residues ) H3 detected: EWAEDGDFGNAFHV ( 14 residues ) H2 detected: YVYHTGVTNYNPSLKS ( 16 residues ) FR_H1: EVQLQESGPGLVKPSETLSLTCTVS FR_H2: WIRQPPGKGLEYLG FR_H3: RLTITIDTSRKQLSLSLKFVTAADSAVYYCAR FR_H4: WGQGTMVAVSSA H segments: EVQLQESGPGLVKPSETLSLTCTVS GGPINNAYWT WIRQPPGKGLEYLG YVYHTGVTNYNPSLKS RLTITIDTSRKQLSLSLKFVTAADSAVYYCAR EWAEDGDFGNAFHV WGQGTMVAVSSA CDR: { "FR_H1": "EVQLQESGPGLVKPSETLSLTCTVS", "FR_H2": "WIRQPPGKGLEYLG", "FR_H3": "RLTITIDTSRKQLSLSLKFVTAADSAVYYCAR", "FR_H4": "WGQGTMVAVSSA", "FR_L1": "SYVLTQPPSVSVSPGQTARITC", "FR_L2": "WYRQRPGQAPLLIIY", "FR_L3": "GIPERFSGSTSGTTVTLTISGVQAEDEADYYC", "FR_L4": "FGGGTKVTVLGQ", "H1": "GGPINNAYWT", "H2": "YVYHTGVTNYNPSLKS", "H3": "EWAEDGDFGNAFHV", "L1": "SAEALSNQYAY", "L2": "KDTKRPS", "L3": "QSADSSGDYV" } FRH: OK FRL: OK H1: OK H2: OK H3: OK L1: OK L2: OK L3: OK heavy: OK light: OK numbering_H: OK numbering_L: OK Testing target: 3GO1... OK Testing target: 3GGW... light_chain: DIVMTQAAFSNPVTLGTSASISCRSSKSLLHSDGITYLYWYLQKPGQSPHLLIYHLSNLASGVPDRFSSSGSGTDFTLRISRVEAEDVGIYYCAHNVELPRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC heavy_chain: EVKVEESGGGLVQPGGSMKISCVVSGLTFSNYWMSWVRQSPEKGLEWVAEIRLKSDNYATYYAESVKGKFTISRDDSKSRLYLQMNNLRTEDTGIYYCFLPMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC L1 detected: RSSKSLLHSDGITYLY ( 16 residues ) L3 detected: AHNVELPRT ( 9 residues ) L2 detected: HLSNLAS ( 7 residues ) FR_L1: DIVMTQAAFSNPVTLGTSASISC FR_L2: WYLQKPGQSPHLLIY FR_L3: GVPDRFSSSGSGTDFTLRISRVEAEDVGIYYC FR_L4: FGGGTKLEIKRA L segments: DIVMTQAAFSNPVTLGTSASISC RSSKSLLHSDGITYLY WYLQKPGQSPHLLIY HLSNLAS GVPDRFSSSGSGTDFTLRISRVEAEDVGIYYC AHNVELPRT FGGGTKLEIKRA H1 detected: GLTFSNYWMS ( 10 residues ) H3 detected: PMDY ( 4 residues ) H2 detected: EIRLKSDNYATYYAESVKG ( 19 residues ) FR_H1: EVKVEESGGGLVQPGGSMKISCVVS FR_H2: WVRQSPEKGLEWVA FR_H3: KFTISRDDSKSRLYLQMNNLRTEDTGIYYCFL FR_H4: WGQGTSVTVSSA H segments: EVKVEESGGGLVQPGGSMKISCVVS GLTFSNYWMS WVRQSPEKGLEWVA EIRLKSDNYATYYAESVKG KFTISRDDSKSRLYLQMNNLRTEDTGIYYCFL PMDY WGQGTSVTVSSA CDR: { "FR_H1": "EVKVEESGGGLVQPGGSMKISCVVS", "FR_H2": "WVRQSPEKGLEWVA", "FR_H3": "KFTISRDDSKSRLYLQMNNLRTEDTGIYYCFL", "FR_H4": "WGQGTSVTVSSA", "FR_L1": "DIVMTQAAFSNPVTLGTSASISC", "FR_L2": "WYLQKPGQSPHLLIY", "FR_L3": "GVPDRFSSSGSGTDFTLRISRVEAEDVGIYYC", "FR_L4": "FGGGTKLEIKRA", "H1": "GLTFSNYWMS", "H2": "EIRLKSDNYATYYAESVKG", "H3": "PMDY", "L1": "RSSKSLLHSDGITYLY", "L2": "HLSNLAS", "L3": "AHNVELPRT" } FRH: OK FRL: OK H1: OK H2: OK H3: OK L1: OK L2: OK L3: OK heavy: OK light: OK ERROR: target=3GGW field numbering_H is not equal!!! expected:E 1 V 2 K 3 V 4 E 5 E 6 S 7 G 8 G 9 G 10 L 11 V 12 Q 13 P 14 G 15 G 16 S 17 M 18 K 19 I 20 S 21 C 22 V 23 V 24 S 25 G 26 L 27 T 28 F 29 S 30 N 31 Y 32 W 33 M 34 S 35 W 36 V 37 R 38 Q 39 S 40 P 41 E 42 K 43 G 44 L 45 E 46 W 47 V 48 A 49 E 50 I 51 R 52 L 52A K 52B S 52C D 53 N 54 Y 55 A 56 T 57 Y 58 Y 59 A 60 E 61 S 62 V 63 K 64 G 65 K 66 F 67 T 68 I 69 S 70 R 71 D 72 D 73 S 74 K 75 S 76 R 77 L 78 Y 79 L 80 Q 81 M 82 N 82A N 82B L 82C R 83 T 84 E 85 D 86 T 87 G 88 I 89 Y 90 Y 91 C 92 F 93 L 94 P 95 M 96 D 97 Y 98 W 103 G 104 Q 105 G 106 T 107 S 108 V 109 T 110 V 111 S 112 S 113 A 114 got:E 1 V 2 K 3 V 4 E 5 E 6 S 7 G 8 G 9 G 10 L 11 V 12 Q 13 P 14 G 15 G 16 S 17 M 18 K 19 I 20 S 21 C 22 V 23 V 24 S 25 G 26 L 27 T 28 F 29 S 30 N 31 Y 32 W 33 M 34 S 35 W 36 V 37 R 38 Q 39 S 40 P 41 E 42 K 43 G 44 L 45 E 46 W 47 V 48 A 49 E 50 I 51 R 52 L 52A K 52B S 52C D 53 N 54 Y 55 A 56 T 57 Y 58 Y 59 A 60 E 61 S 62 V 63 K 64 G 65 K 66 F 67 T 68 I 69 S 70 R 71 D 72 D 73 S 74 K 75 S 76 R 77 L 78 Y 79 L 80 Q 81 M 82 N 82A N 82B L 82C R 83 T 84 E 85 D 86 T 87 G 88 I 89 Y 90 Y 91 C 92 F 93 L 94 P 95 M 96 D 101 Y 102 W 103 G 104 Q 105 G 106 T 107 S 108 V 109 T 110 V 111 S 112 S 113 A 114