protocols.cyclic_peptide_predict.SimpleCycpepPredictApplication: Loaded ABBA.bin_params. protocols.cyclic_peptide_predict.SimpleCycpepPredictApplication: Opened seq.txt for read. protocols.cyclic_peptide_predict.SimpleCycpepPredictApplication: Parsed the following sequence: protocols.cyclic_peptide_predict.SimpleCycpepPredictApplication: CYS, ASP, SER, ASP, ILE, PHE, LYS, GLY, GLU, PRO, ALA, LEU, LEU, PRO, ASP, SER, PRO, MET, GLU, GLN, LEU, CYS, TYR. protocols.cyclic_peptide_predict.SimpleCycpepPredictApplication: Building sequence CYS ASP SER ASP ILE PHE LYS GLY GLU PRO ALA LEU LEU PRO ASP SER PRO MET GLU GLN LEU CYS TYR. protocols.cyclic_peptide_predict.SimpleCycpepPredictApplication: Build successful. protocols.cyclic_peptide_predict.SimpleCycpepPredictApplication: Importing native structure from native.pdb. protocols.cyclic_peptide_predict.SimpleCycpepPredictApplication: Improrting native structure from native.pdb. protocols.cyclic_peptide_predict.SimpleCycpepPredictApplication: last_disulf_res = 23. protocols.cyclic_peptide_predict.SimpleCycpepPredictApplication: last_disulf = 23. ERROR: Error in protocols::cyclic_peptide_predict::SimpleCycpepPredictpplication::set_up_terminal_disulfide_cyclization_mover(): The second residue that is supposed to form the disulfide doesn't contain a sidechain thiol. ERROR:: Exit from: src/protocols/cyclic_peptide_predict/SimpleCycpepPredictApplication.cc line: 2258 BACKTRACE: /data/test_compil_rosetta/rosetta_src_2019.07.60616_bundle/main/source/build/src/debug/linux/4.19/64/x86/clang/7.0/default/libcore.5.so(print_backtrace(char const*)+0x45) [0x7f9e7cfc9cb5] /data/test_compil_rosetta/rosetta_src_2019.07.60616_bundle/main/source/build/src/debug/linux/4.19/64/x86/clang/7.0/default/libutility.so(utility::exit(char const*, int, std::__cxx11::basic_string, std::allocator > const&, int)+0x333) [0x7f9e74591383] /data/test_compil_rosetta/rosetta_src_2019.07.60616_bundle/main/source/build/src/debug/linux/4.19/64/x86/clang/7.0/default/libprotocols.7.so(protocols::cyclic_peptide_predict::SimpleCycpepPredictApplication::set_up_terminal_disulfide_cyclization_mover(std::shared_ptr, std::shared_ptr, bool, unsigned long, unsigned long) const+0x411) [0x7f9e8b61bbf1] /data/test_compil_rosetta/rosetta_src_2019.07.60616_bundle/main/source/build/src/debug/linux/4.19/64/x86/clang/7.0/default/libprotocols.7.so(protocols::cyclic_peptide_predict::SimpleCycpepPredictApplication::set_up_cyclization_mover(std::shared_ptr, std::shared_ptr, bool, unsigned long, unsigned long) const+0x190) [0x7f9e8b608d90] /data/test_compil_rosetta/rosetta_src_2019.07.60616_bundle/main/source/build/src/debug/linux/4.19/64/x86/clang/7.0/default/libprotocols.7.so(protocols::cyclic_peptide_predict::SimpleCycpepPredictApplication::set_up_native(std::shared_ptr, unsigned long) const+0x4d8) [0x7f9e8b6002a8] /data/test_compil_rosetta/rosetta_src_2019.07.60616_bundle/main/source/build/src/debug/linux/4.19/64/x86/clang/7.0/default/libprotocols.7.so(protocols::cyclic_peptide_predict::SimpleCycpepPredictApplication::import_and_set_up_native(std::__cxx11::basic_string, std::allocator > const&, std::shared_ptr, unsigned long) const+0xb1) [0x7f9e8b607051] /data/test_compil_rosetta/rosetta_src_2019.07.60616_bundle/main/source/build/src/debug/linux/4.19/64/x86/clang/7.0/default/libprotocols.7.so(protocols::cyclic_peptide_predict::SimpleCycpepPredictApplication::run() const+0x180c) [0x7f9e8b60356c] /data/test_compil_rosetta/rosetta_src_2019.07.60616_bundle/main/source/bin/simple_cycpep_predict.default.linuxclangdebug(+0x277f) [0x55b2191cf77f] /usr/lib/libc.so.6(__libc_start_main+0xf3) [0x7f9e72e5d223] /data/test_compil_rosetta/rosetta_src_2019.07.60616_bundle/main/source/bin/simple_cycpep_predict.default.linuxclangdebug(+0x250e) [0x55b2191cf50e]