core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-1, 669-2, 669-3, 670-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-2, 669-3, 670-1, 670-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-3, 670-1, 670-2, 670-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 670 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-1, 253-2, 253-3, 254-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 253 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-2, 253-3, 254-1, 254-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 253 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-3, 254-1, 254-2, 254-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 254 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-3, 35-1, 35-2, 35-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 35 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-3, 670-1, 670-2, 670-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 670 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-1, 669-2, 669-3, 670-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-2, 669-3, 670-1, 670-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-3, 670-1, 670-2, 670-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 670 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-1, 253-2, 253-3, 254-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 253 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-2, 253-3, 254-1, 254-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 253 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-3, 254-1, 254-2, 254-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 254 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-1, 34-2, 34-3, 35-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-2, 34-3, 35-1, 35-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-3, 35-1, 35-2, 35-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 35 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-1, 253-2, 253-3, 254-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 253 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-2, 253-3, 254-1, 254-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 253 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-3, 254-1, 254-2, 254-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 254 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 563-1, 563-2, 563-3, 564-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 563 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 563-2, 563-3, 564-1, 564-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 563 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 563-3, 564-1, 564-2, 564-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 564 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-1, 669-2, 669-3, 670-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-2, 669-3, 670-1, 670-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-3, 670-1, 670-2, 670-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 670 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-3, 254-1, 254-2, 254-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 254 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-1, 669-2, 669-3, 670-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-2, 669-3, 670-1, 670-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-3, 670-1, 670-2, 670-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 670 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-3, 670-1, 670-2, 670-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 670 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-1, 669-2, 669-3, 670-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-2, 669-3, 670-1, 670-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-3, 670-1, 670-2, 670-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 670 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-1, 669-2, 669-3, 670-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-2, 669-3, 670-1, 670-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-3, 670-1, 670-2, 670-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 670 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-1, 669-2, 669-3, 670-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-2, 669-3, 670-1, 670-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-3, 670-1, 670-2, 670-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 670 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-1, 34-2, 34-3, 35-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-2, 34-3, 35-1, 35-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-3, 35-1, 35-2, 35-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 35 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-1, 669-2, 669-3, 670-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-2, 669-3, 670-1, 670-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-3, 670-1, 670-2, 670-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 670 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-1, 34-2, 34-3, 35-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-2, 34-3, 35-1, 35-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-3, 35-1, 35-2, 35-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 35 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 563-1, 563-2, 563-3, 564-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 563 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 563-2, 563-3, 564-1, 564-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 563 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 563-3, 564-1, 564-2, 564-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 564 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-1, 34-2, 34-3, 35-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-2, 34-3, 35-1, 35-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-3, 35-1, 35-2, 35-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 35 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-1, 34-2, 34-3, 35-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-2, 34-3, 35-1, 35-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-3, 35-1, 35-2, 35-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 35 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-3, 670-1, 670-2, 670-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 670 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-1, 34-2, 34-3, 35-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-2, 34-3, 35-1, 35-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-3, 35-1, 35-2, 35-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 35 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 563-1, 563-2, 563-3, 564-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 563 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 563-2, 563-3, 564-1, 564-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 563 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 563-3, 564-1, 564-2, 564-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 564 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-1, 34-2, 34-3, 35-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-2, 34-3, 35-1, 35-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-3, 35-1, 35-2, 35-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 35 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-1, 34-2, 34-3, 35-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-2, 34-3, 35-1, 35-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-3, 35-1, 35-2, 35-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 35 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-1, 34-2, 34-3, 35-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-2, 34-3, 35-1, 35-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-3, 35-1, 35-2, 35-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 35 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-1, 669-2, 669-3, 670-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-2, 669-3, 670-1, 670-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-3, 670-1, 670-2, 670-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 670 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-1, 669-2, 669-3, 670-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-2, 669-3, 670-1, 670-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-3, 670-1, 670-2, 670-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 670 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-1, 34-2, 34-3, 35-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-2, 34-3, 35-1, 35-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-3, 35-1, 35-2, 35-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 35 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 563-1, 563-2, 563-3, 564-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 563 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 563-2, 563-3, 564-1, 564-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 563 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 563-3, 564-1, 564-2, 564-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 564 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-1, 34-2, 34-3, 35-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-2, 34-3, 35-1, 35-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-3, 35-1, 35-2, 35-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 35 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-1, 669-2, 669-3, 670-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-2, 669-3, 670-1, 670-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-3, 670-1, 670-2, 670-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 670 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-1, 253-2, 253-3, 254-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 253 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-2, 253-3, 254-1, 254-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 253 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-3, 254-1, 254-2, 254-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 254 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-1, 34-2, 34-3, 35-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-2, 34-3, 35-1, 35-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-3, 35-1, 35-2, 35-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 35 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 563-1, 563-2, 563-3, 564-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 563 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 563-2, 563-3, 564-1, 564-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 563 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 563-3, 564-1, 564-2, 564-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 564 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-1, 669-2, 669-3, 670-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-2, 669-3, 670-1, 670-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-3, 670-1, 670-2, 670-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 670 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-1, 34-2, 34-3, 35-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-2, 34-3, 35-1, 35-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-3, 35-1, 35-2, 35-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 35 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-3, 670-1, 670-2, 670-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 670 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-1, 34-2, 34-3, 35-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-2, 34-3, 35-1, 35-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-3, 35-1, 35-2, 35-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 35 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-1, 669-2, 669-3, 670-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-2, 669-3, 670-1, 670-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-3, 670-1, 670-2, 670-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 670 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 563-3, 564-1, 564-2, 564-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 564 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-1, 34-2, 34-3, 35-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-2, 34-3, 35-1, 35-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-3, 35-1, 35-2, 35-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 35 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 563-1, 563-2, 563-3, 564-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 563 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 563-2, 563-3, 564-1, 564-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 563 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 563-3, 564-1, 564-2, 564-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 564 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-1, 669-2, 669-3, 670-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-2, 669-3, 670-1, 670-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-3, 670-1, 670-2, 670-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 670 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-1, 34-2, 34-3, 35-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-2, 34-3, 35-1, 35-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-3, 35-1, 35-2, 35-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 35 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-1, 253-2, 253-3, 254-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 253 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-2, 253-3, 254-1, 254-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 253 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-3, 254-1, 254-2, 254-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 254 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-1, 669-2, 669-3, 670-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-2, 669-3, 670-1, 670-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-3, 670-1, 670-2, 670-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 670 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 563-1, 563-2, 563-3, 564-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 563 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 563-2, 563-3, 564-1, 564-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 563 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 563-3, 564-1, 564-2, 564-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 564 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-1, 34-2, 34-3, 35-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-2, 34-3, 35-1, 35-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-3, 35-1, 35-2, 35-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 35 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 563-1, 563-2, 563-3, 564-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 563 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 563-2, 563-3, 564-1, 564-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 563 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 563-3, 564-1, 564-2, 564-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 564 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-1, 34-2, 34-3, 35-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-2, 34-3, 35-1, 35-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-3, 35-1, 35-2, 35-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 35 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-1, 253-2, 253-3, 254-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 253 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-2, 253-3, 254-1, 254-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 253 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-3, 254-1, 254-2, 254-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 254 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-1, 253-2, 253-3, 254-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 253 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-2, 253-3, 254-1, 254-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 253 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-3, 254-1, 254-2, 254-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 254 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-1, 34-2, 34-3, 35-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-2, 34-3, 35-1, 35-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-3, 35-1, 35-2, 35-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 35 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-1, 34-2, 34-3, 35-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-2, 34-3, 35-1, 35-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-3, 254-1, 254-2, 254-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 254 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-3, 35-1, 35-2, 35-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 35 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-1, 669-2, 669-3, 670-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-2, 669-3, 670-1, 670-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-1, 669-2, 669-3, 670-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-2, 669-3, 670-1, 670-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-3, 670-1, 670-2, 670-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 670 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-1, 669-2, 669-3, 670-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-2, 669-3, 670-1, 670-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-1, 669-2, 669-3, 670-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-2, 669-3, 670-1, 670-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 669 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-1, 34-2, 34-3, 35-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-2, 34-3, 35-1, 35-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 563-3, 564-1, 564-2, 564-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 564 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-3, 35-1, 35-2, 35-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 35 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-1, 34-2, 34-3, 35-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-2, 34-3, 35-1, 35-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-1, 490-2, 490-3, 491-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-2, 490-3, 491-1, 491-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 490 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-3, 189-1, 189-2, 189-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 189 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-1, 253-2, 253-3, 254-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 253 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-2, 253-3, 254-1, 254-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 253 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-3, 254-1, 254-2, 254-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 254 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-1, 188-2, 188-3, 189-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 188-2, 188-3, 189-1, 189-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 188 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-3, 670-1, 670-2, 670-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 670 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 669-3, 670-1, 670-2, 670-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 670 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-1, 34-2, 34-3, 35-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-2, 34-3, 35-1, 35-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-1, 253-2, 253-3, 254-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 253 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-2, 253-3, 254-1, 254-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 253 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-1, 34-2, 34-3, 35-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 34-2, 34-3, 35-1, 35-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 34 BB 3 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 490-3, 491-1, 491-2, 491-3! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 491 BB 1 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-1, 253-2, 253-3, 254-1! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 253 BB 2 core.kinematics.AtomTree: [ ERROR ] No proper DoF can be found for these four atoms: 253-2, 253-3, 254-1, 254-2! core.kinematics.AtomTree: [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 253 BB 3 protocols.forge.remodel.RemodelMover: start stop cut cbreak protocols.forge.remodel.RemodelMover: 26 36 34 20.5802 protocols.forge.remodel.RemodelMover: 151 189 188 33.9348 protocols.forge.remodel.RemodelMover: 250 266 253 15.0633 protocols.forge.remodel.RemodelMover: 436 500 490 35.1218 protocols.forge.remodel.RemodelMover: 560 570 563 18.8348 protocols.forge.remodel.RemodelMover: 661 701 669 30.6405 protocols.forge.remodel.RemodelMover: * closure_attempt 1 protocols.forge.remodel.RemodelMover: ** simultaneous_stage protocols.forge.remodel.RemodelMover: n_loops = 6 protocols.loops.loops_main: Added cutpoint variant to residue 34 protocols.loops.loops_main: Added cutpoint variant to residue 35 protocols.loops.loops_main: Added cutpoint variant to residue 188 protocols.loops.loops_main: Added cutpoint variant to residue 189 protocols.loops.loops_main: Added cutpoint variant to residue 253 protocols.loops.loops_main: Added cutpoint variant to residue 254 protocols.loops.loops_main: Added cutpoint variant to residue 490 protocols.loops.loops_main: Added cutpoint variant to residue 491 protocols.loops.loops_main: Added cutpoint variant to residue 563 protocols.loops.loops_main: Added cutpoint variant to residue 564 protocols.loops.loops_main: Added cutpoint variant to residue 669 protocols.loops.loops_main: Added cutpoint variant to residue 670 protocols.forge.remodel.RemodelMover: ------------------------------------------------------------ Scores Weight Raw Score Wghtd.Score ------------------------------------------------------------ vdw 1.000 1.038 1.038 hbond_sr_bb 1.000 -400.803 -400.803 hbond_lr_bb 1.000 -22.623 -22.623 rama 0.100 -198.063 -19.806 omega 1.000 191.024 191.024 rg 1.000 45.362 45.362 linear_chainbreak 0.556 38.218 21.232 --------------------------------------------------- Total weighted score: -184.576 protocols.forge.remodel.RemodelMover: protocols.moves.MonteCarlo: MC: 2 -133.014 -184.576 -133.014 -184.576 0 0 0 rejected protocols.moves.TrialCounter: ccd_move trials= 1968; accepts= 0.0274; energy_drop/trial= 0.00230 protocols.moves.TrialCounter: simul_frag trials= 80448; accepts= 0.2309; energy_drop/trial= -0.01549 protocols.forge.remodel.RemodelMover: start stop cut cbreak protocols.forge.remodel.RemodelMover: 26 36 34 38.2179 protocols.forge.remodel.RemodelMover: 151 189 188 38.2179 protocols.forge.remodel.RemodelMover: 250 266 253 38.2179 protocols.forge.remodel.RemodelMover: 436 500 490 38.2179 protocols.forge.remodel.RemodelMover: 560 570 563 38.2179 protocols.forge.remodel.RemodelMover: 661 701 669 38.2179 protocols.forge.remodel.RemodelMover: ** independent_stage protocols.forge.remodel.RemodelMover: n_loops = 6 protocols.loops.loops_main: Added cutpoint variant to residue 253 protocols.loops.loops_main: Added cutpoint variant to residue 254 protocols.forge.remodel.RemodelMover: ------------------------------------------------------------ Scores Weight Raw Score Wghtd.Score ------------------------------------------------------------ vdw 1.000 2.269 2.269 hbond_sr_bb 1.000 -399.289 -399.289 hbond_lr_bb 1.000 -22.623 -22.623 rama 0.100 -161.096 -16.110 omega 1.000 340.252 340.252 rg 1.000 45.366 45.366 linear_chainbreak 2.778 0.058 0.162 --------------------------------------------------- Total weighted score: -49.972 protocols.forge.remodel.RemodelMover: protocols.moves.MonteCarlo: MC: 2 -46.7311 -49.9716 -46.7311 -49.9716 0 0 0 rejected protocols.moves.TrialCounter: ccd_move trials= 497; accepts= 0.6539; energy_drop/trial= -0.02072 protocols.moves.TrialCounter: frag trials= 3452; accepts= 0.0646; energy_drop/trial= 0.00287 protocols.loops.loops_main: Added cutpoint variant to residue 490 protocols.loops.loops_main: Added cutpoint variant to residue 491 protocols.forge.remodel.RemodelMover: ------------------------------------------------------------ Scores Weight Raw Score Wghtd.Score ------------------------------------------------------------ vdw 1.000 2.384 2.384 hbond_sr_bb 1.000 -397.485 -397.485 hbond_lr_bb 1.000 -22.699 -22.699 rama 0.100 -170.151 -17.015 omega 1.000 301.591 301.591 rg 1.000 45.434 45.434 linear_chainbreak 5.000 0.000 0.000 --------------------------------------------------- Total weighted score: -87.789 protocols.forge.remodel.RemodelMover: protocols.moves.MonteCarlo: MC: 2 -84.1595 -87.7893 -84.1595 -87.7893 0 0 0 accepted thermally protocols.moves.TrialCounter: ccd_move trials= 1853; accepts= 0.9482; energy_drop/trial= -0.06063 protocols.moves.TrialCounter: frag trials= 13388; accepts= 0.0048; energy_drop/trial= 0.00796 protocols.loops.loops_main: Added cutpoint variant to residue 188 protocols.loops.loops_main: Added cutpoint variant to residue 189 protocols.forge.remodel.RemodelMover: ------------------------------------------------------------ Scores Weight Raw Score Wghtd.Score ------------------------------------------------------------ vdw 1.000 3.850 3.850 hbond_sr_bb 1.000 -399.252 -399.252 hbond_lr_bb 1.000 -22.699 -22.699 rama 0.100 -169.191 -16.919 omega 1.000 307.632 307.632 rg 1.000 45.662 45.662 linear_chainbreak 7.222 0.022 0.162 --------------------------------------------------- Total weighted score: -81.564 protocols.forge.remodel.RemodelMover: protocols.moves.MonteCarlo: MC: 2 -78.683 -81.5643 -78.683 -81.5643 0 0 0 accepted score beat last protocols.moves.TrialCounter: ccd_move trials= 1079; accepts= 0.8341; energy_drop/trial= -0.04891 protocols.moves.TrialCounter: frag trials= 8164; accepts= 0.0093; energy_drop/trial= 0.00299 protocols.loops.loops_main: Added cutpoint variant to residue 34 protocols.loops.loops_main: Added cutpoint variant to residue 35 protocols.forge.remodel.RemodelMover: ------------------------------------------------------------ Scores Weight Raw Score Wghtd.Score ------------------------------------------------------------ vdw 1.000 4.397 4.397 hbond_sr_bb 1.000 -399.566 -399.566 hbond_lr_bb 1.000 -22.699 -22.699 rama 0.100 -168.686 -16.869 omega 1.000 279.500 279.500 rg 1.000 45.663 45.663 linear_chainbreak 9.444 0.009 0.086 --------------------------------------------------- Total weighted score: -109.487 protocols.forge.remodel.RemodelMover: protocols.moves.MonteCarlo: MC: 2 -109.393 -109.487 -109.393 -109.487 0 0 0 accepted thermally protocols.moves.TrialCounter: ccd_move trials= 319; accepts= 0.9906; energy_drop/trial= -0.13842 protocols.moves.TrialCounter: frag trials= 2244; accepts= 0.0040; energy_drop/trial= -0.00281 protocols.loops.loops_main: Added cutpoint variant to residue 563 protocols.loops.loops_main: Added cutpoint variant to residue 564 protocols.forge.remodel.RemodelMover: ------------------------------------------------------------ Scores Weight Raw Score Wghtd.Score ------------------------------------------------------------ vdw 1.000 5.264 5.264 hbond_sr_bb 1.000 -400.151 -400.151 hbond_lr_bb 1.000 -22.699 -22.699 rama 0.100 -170.604 -17.060 omega 1.000 251.378 251.378 rg 1.000 45.653 45.653 linear_chainbreak 11.667 0.062 0.723 --------------------------------------------------- Total weighted score: -136.892 protocols.forge.remodel.RemodelMover: protocols.moves.MonteCarlo: MC: 2 -134.567 -136.892 -134.567 -136.892 0 0 0 accepted thermally protocols.moves.TrialCounter: ccd_move trials= 308; accepts= 0.8669; energy_drop/trial= -0.24107 protocols.moves.TrialCounter: frag trials= 2288; accepts= 0.0070; energy_drop/trial= 0.00076 protocols.loops.loops_main: Added cutpoint variant to residue 669 protocols.loops.loops_main: Added cutpoint variant to residue 670 protocols.forge.remodel.RemodelMover: ------------------------------------------------------------ Scores Weight Raw Score Wghtd.Score ------------------------------------------------------------ vdw 1.000 5.227 5.227 hbond_sr_bb 1.000 -398.919 -398.919 hbond_lr_bb 1.000 -22.699 -22.699 rama 0.100 -173.656 -17.366 omega 1.000 251.659 251.659 rg 1.000 45.592 45.592 linear_chainbreak 13.889 0.000 0.000 --------------------------------------------------- Total weighted score: -136.505 protocols.forge.remodel.RemodelMover: protocols.moves.MonteCarlo: MC: 2 -136.505 -136.505 -136.505 -136.505 0 0 0 rejected protocols.moves.TrialCounter: ccd_move trials= 1155; accepts= 0.9541; energy_drop/trial= -0.03652 protocols.moves.TrialCounter: frag trials= 8500; accepts= 0.0011; energy_drop/trial= -0.00002 protocols.forge.remodel.RemodelMover: start stop cut cbreak protocols.forge.remodel.RemodelMover: 26 36 34 0.0303696 protocols.forge.remodel.RemodelMover: 151 189 188 0.0606941 protocols.forge.remodel.RemodelMover: 250 266 253 0.0352091 protocols.forge.remodel.RemodelMover: 436 500 490 0.00474178 protocols.forge.remodel.RemodelMover: 560 570 563 0.0834722 protocols.forge.remodel.RemodelMover: 661 701 669 0.0121531 protocols.forge.remodel.RemodelMover: ** boost_closure_stage protocols.forge.remodel.RemodelMover: n_loops = 1 protocols.forge.remodel.RemodelMover: ** boost_closure stage: using fragment size = 1 protocols.loops.loops_main: Added cutpoint variant to residue 563 protocols.loops.loops_main: Added cutpoint variant to residue 564 protocols.forge.remodel.RemodelMover: ------------------------------------------------------------ Scores Weight Raw Score Wghtd.Score ------------------------------------------------------------ vdw 1.000 5.227 5.227 hbond_sr_bb 1.000 -398.919 -398.919 hbond_lr_bb 1.000 -22.699 -22.699 rama 0.100 -173.675 -17.368 omega 1.000 248.534 248.534 rg 1.000 45.592 45.592 linear_chainbreak 13.889 0.083 1.159 --------------------------------------------------- Total weighted score: -138.472 protocols.forge.remodel.RemodelMover: protocols.moves.MonteCarlo: MC: 2 -136.589 -138.472 -136.589 -138.472 0 0 0 accepted thermally protocols.moves.TrialCounter: ccd_move trials= 2514; accepts= 0.9885; energy_drop/trial= -0.00524 protocols.moves.TrialCounter: frag1 trials= 786; accepts= 0.0038; energy_drop/trial= 0.01916 protocols.forge.remodel.RemodelMover: start stop cut cbreak protocols.forge.remodel.RemodelMover: 26 36 34 0.0303696 protocols.forge.remodel.RemodelMover: 151 189 188 0.0606941 protocols.forge.remodel.RemodelMover: 250 266 253 0.0352091 protocols.forge.remodel.RemodelMover: 436 500 490 0.00474178 protocols.forge.remodel.RemodelMover: 560 570 563 0.0834722 protocols.forge.remodel.RemodelMover: 661 701 669 0.0121531 protocols.forge.remodel.RemodelMover: * 0 / 1 closed / attempts protocols.forge.components.VarLengthBuild: centroid_build: loop: 26-36, final chainbreak = 0.113842, max_linear_chainbreak_: 0.07 protocols.forge.components.VarLengthBuild: centroid_build: final chainbreak at 34 = 0.113842 max tolerance 0.07 protocols.forge.remodel.RemodelMover: centroid_build(): variable length build failed. resetting pose to archived pose. protocols.forge.remodel.RemodelMover: centroid_build(): centroid_build unable to close loop. retrying. protocols.forge.remodel.RemodelMover: apply(): number of attempts at loop closure made: 1 protocols.forge.remodel.RemodelMover: clustered poses count: 0 protocols.forge.remodel.RemodelMover: Remodel poses remaining from original run: 0 basic.io.database: Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBPoly1D.csv basic.io.database: Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBFadeIntervals.csv basic.io.database: Database file opened: scoring/score_functions/hbonds/sp2_elec_params/HBEval.csv protocols.jd2.JobDistributor: 5flz_model1_0003_A-numb_0001 reported success in 3694 seconds protocols.jd2.JobDistributor: no more batches to process... protocols.jd2.JobDistributor: 1 jobs considered, 1 jobs attempted in 3695 seconds protocols.jd2.JobDistributor: [ WARNING ] The following options have been set, but have not yet been used: -remodel:quick_and_dirty