StepWiseLegacyClustererSilentBased.cc File Reference

#include <protocols/stepwise/modeler/align/StepWiseLegacyClustererSilentBased.hh>
#include <protocols/stepwise/modeler/options/StepWiseModelerOptions.hh>
#include <protocols/stepwise/modeler/util.hh>
#include <core/types.hh>
#include <core/pose/Pose.hh>
#include <core/pose/util.hh>
#include <core/chemical/ResidueTypeSet.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/io/silent/SilentStruct.hh>
#include <core/io/silent/SilentFileData.hh>
#include <core/import_pose/pose_stream/PoseInputStream.hh>
#include <core/import_pose/pose_stream/PoseInputStream.fwd.hh>
#include <core/import_pose/pose_stream/SilentFilePoseInputStream.hh>
#include <core/scoring/rms_util.hh>
#include <basic/Tracer.hh>
#include <utility/vector1.hh>
#include <utility/tools/make_vector1.hh>
#include <ObjexxFCL/string.functions.hh>
#include <ObjexxFCL/format.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <list>
#include <core/id/AtomID.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::stepwise
	protocols::stepwise::modeler
	protocols::stepwise::modeler::align

Functions
static thread_local basic::Tracer	TR ("protocols.stepwise.modeler.align.StepWiseLegacyClustererSilentBased")

Function Documentation

static thread_local basic::Tracer TR ( "protocols.stepwise.modeler.align.StepWiseLegacyClustererSilentBased"  )

static

Referenced by protocols::stepwise::modeler::align::StepWiseLegacyClustererSilentBased::cluster(), protocols::stepwise::modeler::align::StepWiseLegacyClustererSilentBased::cluster_with_auto_tune(), protocols::stepwise::modeler::align::StepWiseLegacyClustererSilentBased::do_some_clustering(), and protocols::stepwise::modeler::align::StepWiseLegacyClustererSilentBased::recluster_current_pose_list().