utility::options::OptionKeys::options Namespace Reference

Option display option keys. More...

Namespaces
	table

Variables
BooleanOptionKey const	options ("options")
BooleanOptionKey const	user ("options:user")
BooleanOptionKey const	all ("options:all")
BooleanOptionKey const	exit ("options:exit")

Detailed Description

Option display option keys.

Variable Documentation

BooleanOptionKey const utility::options::OptionKeys::options::all

Referenced by utility::options::OptionCollection::add_built_in_options(), add_rosetta_options_1(), app.pyrosetta_toolkit.modules.DesignBreakdown.DesignBreakdown::are_sequences_for_regions_same_length(), app.pyrosetta_toolkit.modules.DesignBreakdown.DesignBreakdown::are_sequences_same_length(), PerformanceBenchmark::executeAllBenchmarks(), PerformanceBenchmark::executeOneBenchmark(), PerformanceBenchmark::getOneReport(), PerformanceBenchmark::getReport(), utility::options::OptionCollection::load(), src.utility::Set(), src::Set(), src.utility::Vector1(), and src::Vector1().

BooleanOptionKey const utility::options::OptionKeys::options::exit

Referenced by app.pyrosetta_toolkit.window_modules.full_control.FullControlWindow.FullControlWindow::__exit__(), utility::options::OptionCollection::add_built_in_options(), assure(), utility::options::ScalarOption_T_< PathOptionKey, file::PathName >::cl_value(), utility::options::VectorOption_T_< BooleanVectorOptionKey, bool >::cl_value(), correlation_coefficient(), define_interface(), graphics_main(), numeric::fourier::SHT::init(), numeric::fourier::kiss_dct(), numeric::fourier::kiss_fftr(), numeric::fourier::kiss_fftri(), numeric::fourier::kiss_idct(), utility::options::ScalarOption_T_< PathOptionKey, file::PathName >::legal_check(), utility::options::VectorOption_T_< BooleanVectorOptionKey, bool >::legal_check(), utility::options::ScalarOption_T_< PathOptionKey, file::PathName >::legal_default_check(), utility::options::VectorOption_T_< BooleanVectorOptionKey, bool >::legal_default_check(), ligand_rmsd(), utility::options::OptionCollection::load(), load_loops_from_file(), PlotSurfaceContactMap::MAIN(), compare_times::main(), main(), my_main(), ObjexxFCL::internal::ObserverGraph::ObserverGraph(), utility::io::ozstream::open_append(), ObjexxFCL::operator>>(), repack_test(), numeric::fourier::kiss_dct_state::resize(), numeric::fourier::kiss_fftr_state::resize(), utility::options::ScalarOption_T_< PathOptionKey, file::PathName >::specified_check(), utility::options::VectorOption_T_< BooleanVectorOptionKey, bool >::specified_check(), utility::options::std_exit_wrapper(), utility::options::IntegerOption::value_of(), utility::options::RealVectorOption::value_of(), utility::options::IntegerVectorOption::value_of(), utility::options::RealOption::value_of(), utility::options::ResidueChainVectorOption::value_of(), utility::options::BooleanVectorOption::value_of(), utility::options::BooleanOption::value_of(), utility::options::ResidueChainVectorOption::values_of(), and utility::options::IntegerVectorOption::values_of().

BooleanOptionKey const utility::options::OptionKeys::options::options

BooleanOptionKey const utility::options::OptionKeys::options::user

Referenced by utility::options::OptionCollection::add_built_in_options(), apps::public1::scenarios::chemically_conjugated_docking::add_extra_bodies(), add_rosetta_options_0(), align_pdbs(), UBQ_GTPaseMover::analyze_and_filter(), UBQ_GTPase_disulfide_Mover::analyze_and_filter(), UBQ_E2Mover::analyze_and_filter(), ViewMembraneProteinMover::apply(), ExposedStrandMover::apply(), HDdesignMover::apply(), calc_rms_test(), calculate_pairwise_RMSD(), CaToAllAtom::CaToAllAtom(), HDdesignMover::cloak_and_setup(), cluster_outfile_test(), cluster_test(), compute_chem_shift_RMSD(), CoupledMovesProtocol::CoupledMovesProtocol(), create_rna_vall_torsions_test(), create_scorefxn(), create_theozyme_pdb(), cs_rosetta_rna_pdb(), basic::database::db_partition_from_options(), supercharge::design_supercharge(), supercharge::design_supercharge_AvNAPSA(), extract_pdbs_test(), fill_designable_set(), filter_combine_long_loop(), FragmentAssemblyMover::FragmentAssemblyMover(), basic::database::full_cache_name(), gen_pep_bb_sequential(), basic::database::get_db_session(), utility::sql_database::DatabaseSessionManager::get_session_mysql(), utility::sql_database::DatabaseSessionManager::get_session_postgres(), graft_pdb(), import_and_dump_pdb(), UBQ_GTPase_disulfide_Mover::init_on_new_input(), UBQ_GTPaseMover::init_on_new_input(), UBQ_E2Mover::init_on_new_input(), initialize_native_pose(), initialize_peptide(), basic::options::int2afteroption(), basic::options::intafteroption(), utility::options::OptionCollection::load(), main(), make_1mer_frags(), match_main(), MC_run(), mg_modeler_test(), minimize_with_constraints(), my_main(), MyScoreMover::MyScoreMover(), nucleobase_probe_score_test(), optimize_pose(), basic::options::optional_positive_intafteroption(), basic::database::parse_database_connection(), pdb_minimizer(), pdb_to_silent_file(), pep_phipsi_analysis(), pep_rmsd_analysis(), post_rebuild_bulge_assembly(), print_pep_analysis(), print_pep_csts(), basic::options::process(), quick_score_test(), read_input_weights(), read_native_sequence_for_entity_elements(), read_pose(), read_structures(), read_thickness(), basic::options::real2afteroption(), basic::options::real3afteroption(), basic::options::realafteroption(), rebuild_test(), rhiju_pdbstats(), rna_build_helix_test(), rna_denovo_test(), rna_design_test(), rna_fullatom_minimize_test(), rna_sample_virtual_sugar(), rna_score_test(), rna_thread_test(), run(), DockFragmentsMover::run(), ScoreFragmentSetMover::run(), FragmentAssemblyMover::run(), SolutionRescoreMover::run(), run_mc(), run_pep_prep(), RunPepSpec(), sequence_tolerance_main(), supercharge::set_surface(), setup_ca_constraints(), setup_mask(), setup_segment_insert(), zinc1_homodimer_design::setup_taskfactory(), zinc2_homodimer_design::setup_taskfactory_scorefunction_movers(), setup_tf(), slice_ellipsoid_envelope(), slice_sample_res_and_surrounding(), basic::options::start_files(), stepwise_monte_carlo(), basic::options::stringafteroption(), superimpose_pdb(), swa_rna_cluster(), swa_rna_sample(), HDdesignMover::task_constraint_setup(), and basic::options::truefalseoption().