protocols::antibody::PDBLandmark Class Reference

Class that was once a struct; Used for matching pdb information between numbering schemes and cdr definitions. More...

#include <AntibodyNumberingParser.hh>

Inheritance diagram for protocols::antibody::PDBLandmark:

Public Member Functions
	PDBLandmark (char chain, core::Size resnum, char insertion_code)
	PDBLandmark (char chain, core::Size resnum, char insertion_code, AntibodyNumberingSchemeEnum scheme)
	Alternative constructor to hold numbering scheme type as well. More...
virtual	~PDBLandmark ()
core::Size	resnum () const
char	chain () const
char	insertion_code () const
AntibodyNumberingSchemeEnum	numbering_scheme () const
PDBLandmark &	operator= (const PDBLandmark &src)
bool	operator== (const PDBLandmark &compare)
bool	operator!= (const PDBLandmark &compare)
std::string	get_string ()

Private Attributes
AntibodyNumberingSchemeEnum	numbering_scheme_
core::Size	resnum_
char	chain_
char	insertion_code_

Detailed Description

Class that was once a struct; Used for matching pdb information between numbering schemes and cdr definitions.

Constructor & Destructor Documentation

protocols::antibody::PDBLandmark::PDBLandmark	(	char	chain,
		core::Size	resnum,
		char	insertion_code
	)

protocols::antibody::PDBLandmark::PDBLandmark	(	char	chain,
		core::Size	resnum,
		char	insertion_code,
		AntibodyNumberingSchemeEnum	scheme
	)

Alternative constructor to hold numbering scheme type as well.

protocols::antibody::PDBLandmark::~PDBLandmark ( )

virtual

Member Function Documentation

char protocols::antibody::PDBLandmark::chain ( ) const

inline

References chain_.

std::string protocols::antibody::PDBLandmark::get_string

(

)

References core::id::to_string().

char protocols::antibody::PDBLandmark::insertion_code ( ) const

inline

References insertion_code_.

Referenced by protocols::antibody::AntibodyInfo::get_CDR_end(), and protocols::antibody::AntibodyInfo::get_CDR_start().

AntibodyNumberingSchemeEnum protocols::antibody::PDBLandmark::numbering_scheme ( ) const

inline

References numbering_scheme_.

Referenced by protocols::antibody::AntibodyNumberingParser::get_equivalent_landmark().

bool protocols::antibody::PDBLandmark::operator!=

(

const PDBLandmark &

compare

)

References chain_, insertion_code_, and resnum_.

PDBLandmark & protocols::antibody::PDBLandmark::operator=

(

const PDBLandmark &

src

)

References chain_, insertion_code_, numbering_scheme_, and resnum_.

bool protocols::antibody::PDBLandmark::operator==

(

const PDBLandmark &

compare

)

References chain_, insertion_code_, and resnum_.

core::Size protocols::antibody::PDBLandmark::resnum ( ) const

inline

References resnum_.

Referenced by protocols::antibody::AntibodyInfo::get_CDR_end(), and protocols::antibody::AntibodyInfo::get_CDR_start().

Member Data Documentation

char protocols::antibody::PDBLandmark::chain_

private

Referenced by chain(), operator!=(), operator=(), and operator==().

char protocols::antibody::PDBLandmark::insertion_code_

private

Referenced by insertion_code(), operator!=(), operator=(), and operator==().

AntibodyNumberingSchemeEnum protocols::antibody::PDBLandmark::numbering_scheme_

private

Referenced by numbering_scheme(), and operator=().

core::Size protocols::antibody::PDBLandmark::resnum_

private

Referenced by operator!=(), operator=(), operator==(), and resnum().

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The documentation for this class was generated from the following files:

• src/protocols/antibody/AntibodyNumberingParser.hh
• src/protocols/antibody/AntibodyNumberingParser.cc