Rosetta
2019.07
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BooleanOptionKey const basic::options::OptionKeys::out::chname |
Referenced by add_rosetta_options_0(), and main().
BooleanOptionKey const basic::options::OptionKeys::out::chtimestamp |
Referenced by add_rosetta_options_0(), and main().
StringVectorOptionKey const basic::options::OptionKeys::out::database_filter |
Referenced by add_rosetta_options_0().
IntegerOptionKey const basic::options::OptionKeys::out::database_protocol_id |
Referenced by add_rosetta_options_0().
BooleanOptionKey const basic::options::OptionKeys::out::dry_run |
Referenced by add_rosetta_options_0().
IntegerOptionKey const basic::options::OptionKeys::out::level |
StringVectorOptionKey const basic::options::OptionKeys::out::levels |
Referenced by add_rosetta_options_0().
BooleanOptionKey const basic::options::OptionKeys::out::membrane_pdb |
Referenced by add_rosetta_options_0().
RealOptionKey const basic::options::OptionKeys::out::membrane_pdb_thickness |
Referenced by add_rosetta_options_0().
BooleanOptionKey const basic::options::OptionKeys::out::mmCIF |
Referenced by add_rosetta_options_0().
BooleanOptionKey const basic::options::OptionKeys::out::mmCIF_gz |
Referenced by add_rosetta_options_0().
BooleanOptionKey const basic::options::OptionKeys::out::mover_controlled_output_name |
Referenced by add_rosetta_options_0().
StringOptionKey const basic::options::OptionKeys::out::mpi_tracer_to_file |
Referenced by add_rosetta_options_0(), and main().
StringVectorOptionKey const basic::options::OptionKeys::out::mute |
Referenced by add_rosetta_options_0(), main(), and basic::TracerImpl::super_mute_().
BooleanOptionKey const basic::options::OptionKeys::out::no_color |
Referenced by add_rosetta_options_0().
BooleanOptionKey const basic::options::OptionKeys::out::no_nstruct_label |
Referenced by add_rosetta_options_0(), and main().
BooleanOptionKey const basic::options::OptionKeys::out::nooutput |
Referenced by add_rosetta_options_0(), and main().
IntegerOptionKey const basic::options::OptionKeys::out::nstruct |
BooleanOptionKey const basic::options::OptionKeys::out::out |
Referenced by add_rosetta_options_0().
BooleanOptionKey const basic::options::OptionKeys::out::output |
Referenced by add_rosetta_options_0(), convert(), main(), and reverse_convert().
StringOptionKey const basic::options::OptionKeys::out::output_tag |
Referenced by add_rosetta_options_0(), and main().
BooleanOptionKey const basic::options::OptionKeys::out::overwrite |
Referenced by add_rosetta_options_0(), main(), rna_fullatom_minimize_test(), and StepWiseJobQueen::StepWiseJobQueen().
BooleanOptionKey const basic::options::OptionKeys::out::pdb |
Referenced by add_rosetta_options_0(), fill_optional_options(), main(), and rna_fullatom_minimize_test().
BooleanOptionKey const basic::options::OptionKeys::out::pdb_gz |
Referenced by add_rosetta_options_0(), and fill_optional_options().
StringOptionKey const basic::options::OptionKeys::out::prefix |
Referenced by add_rosetta_options_0(), main(), report_and_dump(), and retag().
IntegerVectorOptionKey const basic::options::OptionKeys::out::resume_batch |
Referenced by add_rosetta_options_0().
BooleanOptionKey const basic::options::OptionKeys::out::save_times |
Referenced by add_rosetta_options_0().
RealOptionKey const basic::options::OptionKeys::out::scorecut |
Referenced by add_rosetta_options_0(), and read_silent_input_as_library().
FileOptionKey const basic::options::OptionKeys::out::sf |
Referenced by add_rosetta_options_0(), harvest_motifs(), main(), and output_score().
BooleanOptionKey const basic::options::OptionKeys::out::show_accessed_options |
Referenced by add_rosetta_options_0().
BooleanOptionKey const basic::options::OptionKeys::out::show_unused_options |
Referenced by add_rosetta_options_0().
IntegerOptionKey const basic::options::OptionKeys::out::shuffle_nstruct |
Referenced by add_rosetta_options_0().
BooleanOptionKey const basic::options::OptionKeys::out::silent_gz |
Referenced by add_rosetta_options_0(), and fill_optional_options().
IntegerOptionKey const basic::options::OptionKeys::out::std_IO_exit_error_code |
Referenced by add_rosetta_options_0().
StringOptionKey const basic::options::OptionKeys::out::suffix |
Referenced by add_rosetta_options_0(), main(), numeric::kinematic_closure::operator<<(), and rna_design_test().
StringVectorOptionKey const basic::options::OptionKeys::out::unmute |
Referenced by add_rosetta_options_0(), and main().
BooleanOptionKey const basic::options::OptionKeys::out::use_database |
Referenced by add_rosetta_options_0(), and main().
StringOptionKey const basic::options::OptionKeys::out::user_tag |
Referenced by add_rosetta_options_0(), align_pdbs(), and main().