test.T850_SubClassing Namespace Reference

Classes
class	A
class	My_New_Mover
class	MyNewCI1B
class	MyNewCI1B_Creator
class	PyOverloadTest
class	PyValue

Variables
tuple	a = A()
tuple	v = rosetta.utility.py.Value()
tuple	pv = PyValue()
tuple	ot = rosetta.utility.py.OverloadTest()
tuple	pot = PyOverloadTest()
tuple	new_mover = My_New_Mover()
tuple	pose = rosetta.core.import_pose.pose_from_file("../test/data/test_in.pdb")
tuple	sf_new = rosetta.core.scoring.ScoreFunction()
tuple	seq = rosetta.protocols.moves.SequenceMover()
tuple	minmover = rosetta.protocols.minimization_packing.MinMover()
tuple	old_phi = pose.phi(1)
list	_mem_ = []
tuple	b = MyNewCI1B_Creator()

Variable Documentation

list test.T850_SubClassing._mem_ = []

tuple test.T850_SubClassing.a = A()

Referenced by add_rosetta_options_2(), numeric.angle_radians(), numeric.angles_between_0_180(), basic.calc_quadratic(), numeric::alignment::QCPKernel< Real >.calc_rmsd_Theobald_method(), ObjexxFCL.cross(), ObjexxFCL.cross_product(), numeric.cubic_polynomial_from_spline(), numeric::expression_parser::MultiplyExpression.differentiate(), numeric.dihedral_radians(), ObjexxFCL.distance(), ObjexxFCL.distance_squared(), ObjexxFCL.dot(), ObjexxFCL.dot_product(), numeric::linear_algebra.epslon(), basic::sampling::orientations::Quaternion.euler(), binder.function_arguments_for_lambda(), binder.function_arguments_for_py_overload(), numeric::UniformRotationSampler.generateIcosahedralSamples(), get_gremlin_d_and_width(), numeric::xyzTransform< numeric::Real >.hash64(), numeric::interpolation::periodic_range::full.interpolated(), numeric::interpolation::periodic_range::half.interpolated(), numeric::xyzMatrix< T >.inverse(), numeric::fourier.local_max(), main(), make_fragments(), numeric::interpolation.multilinear_interpolation(), ObjexxFCL.operator<<(), numeric::kinematic_closure.operator<<(), basic::sampling::orientations::Permute.Permute(), numeric::linear_algebra.qzhes(), numeric::linear_algebra.qzit(), numeric::linear_algebra.qzval(), numeric::linear_algebra.qzvec(), ObjexxFCL.read_binary(), ObjexxFCL::CArray< typename >.resize(), ObjexxFCL::CArrayP< typename >.resize(), numeric::linear_algebra.rgg(), numeric::model_quality.rsym_eigenval(), numeric::kinematic_closure.sincos(), numeric::kinematic_closure::radians.sincos(), numeric::interpolation::spline.spline_interpolate(), numeric::linear_algebra.svdcmp(), utility.swap(), numeric::kinematic_closure.test_bondangle(), numeric::kinematic_closure.test_eucDistance(), numeric::kinematic_closure.test_scpn(), numeric::kinematic_closure.test_torsion(), ObjexxFCL.transposed(), numeric::statistics.w(), and ObjexxFCL.write_binary().

tuple test.T850_SubClassing.b = MyNewCI1B_Creator()

Referenced by binder::Context.add(), add_rosetta_options_2(), numeric.angle_radians(), numeric.angles_between_0_180(), binder.base_default_default_constructor_available(), binder::Context.bind(), binder.bind_member_functions_for_call_back(), binder::ClassBinder.bind_nested_classes(), binder.binding_template_bases(), basic::PyTracer.buf(), basic.calc_quadratic(), numeric::alignment::QCPKernel< Real >.calc_rmsd_Theobald_method(), binder::Context.create_all_nested_namespaces(), ObjexxFCL.cross(), ObjexxFCL.cross_product(), numeric.cubic_polynomial_from_spline(), numeric::geometry::hashing::xyzStripeHash.debug_pdb(), numeric::expression_parser::MultiplyExpression.differentiate(), numeric.dihedral_radians(), ObjexxFCL.distance(), ObjexxFCL.distance_squared(), ObjexxFCL.dot(), ObjexxFCL.dot_product(), numeric::linear_algebra.epslon(), utility::pointer.equal(), basic::sampling::orientations::Quaternion.euler(), ObjexxFCL::FArray1D< double >.FArray1D(), find_neighbors_directional(), numeric::UniformRotationSampler.generateIcosahedralSamples(), get_gremlin_d_and_width(), numeric::xyzTransform< numeric::Real >.hash64(), numeric::geometry::hashing::xyzStripeHash.init(), binder.is_callback_structure_constructible(), binder.is_callback_structure_needed(), binder.is_inherited_from_enable_shared_from_this(), ObjexxFCL::Fstring.is_type(), ObjexxFCL::KeyFArray1D< typename >.KeyFArray1D(), utility::options::ScalarOption_T_< PathOptionKey, file::PathName >.legal_string(), utility::options::VectorOption_T_< BooleanVectorOptionKey, bool >.legal_string(), main(), binder::ClassBinder.maybe_base_classes(), numeric::kinematic_closure.modrf(), utility::keys.operator!=(), ObjexxFCL.operator!=(), utility.operator+(), ObjexxFCL.operator+(), utility.operator-(), ObjexxFCL.operator-(), numeric::kinematic_closure.operator<<(), utility.operator|(), basic::sampling::orientations::Permute.Permute(), numeric::linear_algebra.qzhes(), numeric::linear_algebra.qzit(), numeric::linear_algebra.qzval(), numeric::linear_algebra.qzvec(), numeric::linear_algebra.rgg(), numeric::model_quality.rsym_eigenval(), basic::svd::SVD_Solver.set_vector_b(), numeric::geometry::hashing::xyzStripeHashWithMeta< float >.short_max(), numeric::geometry::hashing::xyzStripeHash.short_max(), numeric::geometry::hashing::xyzStripeHashWithMeta< float >.short_min(), numeric::geometry::hashing::xyzStripeHash.short_min(), binder::Context.sort_binders(), numeric::interpolation::spline.spline_interpolate(), utility::keys::KeyLookup< K >.stripped_whitespace(), numeric::kinematic_closure.test_bondangle(), numeric::kinematic_closure.test_eucDistance(), numeric::kinematic_closure.test_scpn(), numeric::kinematic_closure.test_torsion(), numeric::kinematic_closure.triaxialCoefficients(), numeric::kinematic_closure::radians.triaxialCoefficients(), ObjexxFCL::Fstring.type_of(), numeric::geometry::hashing::xyzStripeHashWithMeta< float >.ushort_max(), numeric::geometry::hashing::xyzStripeHash.ushort_max(), numeric::geometry::hashing::xyzStripeHashWithMeta< float >.ushort_min(), numeric::geometry::hashing::xyzStripeHash.ushort_min(), BinderVisitor.VisitCXXRecordDecl(), BinderVisitor.VisitEnumDecl(), BinderVisitor.VisitFunctionDecl(), and utility::options::OptionCollection.wrapped().

tuple test.T850_SubClassing.minmover = rosetta.protocols.minimization_packing.MinMover()

tuple test.T850_SubClassing.new_mover = My_New_Mover()

tuple test.T850_SubClassing.old_phi = pose.phi(1)

tuple test.T850_SubClassing.ot = rosetta.utility.py.OverloadTest()

tuple test.T850_SubClassing.pose = rosetta.core.import_pose.pose_from_file("../test/data/test_in.pdb")

tuple test.T850_SubClassing.pot = PyOverloadTest()

tuple test.T850_SubClassing.pv = PyValue()

Referenced by utility::heap.heap_up().

tuple test.T850_SubClassing.seq = rosetta.protocols.moves.SequenceMover()

Referenced by add_rosetta_options_0(), composite_sequences_from_cmd_line(), helix_from_sequence(), main(), my_main(), Prepare(), utility::tag::XMLSchemaComplexTypeGeneratorImpl.prepare_sequence_of_subelement_sets(), utility::tag::XMLSchemaComplexTypeGeneratorImpl.prepare_subelement_single_instance_required_ordered(), print_seq_map(), rna_build_helix_test(), and rna_thread_test().

tuple test.T850_SubClassing.sf_new = rosetta.core.scoring.ScoreFunction()

tuple test.T850_SubClassing.v = rosetta.utility.py.Value()

Referenced by add(), basic::sampling::orientations::QuatSet.Add(), binder.add_relevant_includes(), utility.argsort(), utility::graph.breadth_first_visit_prune(), numeric::kinematic_closure.chainXYZ(), numeric::kinematic_closure::radians.chainXYZ(), utility::options::VectorOption_T_< BooleanVectorOptionKey, bool >.cl_value(), numeric::geometry::hashing::xyzStripeHash.clash(), numeric::geometry::hashing::xyzStripeHash.clash_amount(), numeric::geometry::hashing::xyzStripeHash.clash_not_resid(), numeric::geometry::hashing::xyzStripeHash.debug_pdb(), utility::graph.depth_first_visit_sort_impl(), numeric::geometry::hashing::xyzStripeHash.fill_pairs(), basic::TracerImpl.flush_all_channels(), utility::tag::Tag.getTag(), harvest_scores(), numeric.inplace_product(), numeric.inplace_transpose_product(), numeric::xyzTransform< numeric::Real >.intersect3D_2Planes(), utility.is_finite(), rosetta_binders.list_add_on_binder(), rosetta_binders.list_add_on_binder_maybe_has_equal_operator(), rosetta_binders.list_add_on_binder_maybe_has_insertion_operator(), main(), utility::tools.make_vector(), utility::tools.make_vector1(), rosetta_binders::utility_vector_binder< Vector, L, T, Allocator >.maybe_copy_constructible(), rosetta_binders::utility_vector_binder< Vector, L, T, Allocator >.maybe_has_equal_operator(), rosetta_binders::utility_vector_binder< Vector, L, T, Allocator >.maybe_has_insertion_operator(), numeric::geometry::hashing::xyzStripeHash.nbcount(), numeric::geometry::hashing::xyzStripeHashWithMeta< float >.nbcount(), ObjexxFCL.operator<<(), basic::Report.operator<<(), utility.operator<<(), basic::Reporter.operator<<(), numeric.operator<<(), ObjexxFCL::ChunkVector< typename >.reshape(), rosetta_binders.set_add_on_binder(), rosetta_binders.set_add_on_binder_maybe_has_insertion_operator(), basic::options.set_boolean_option(), basic::options.set_boolean_vector_option(), basic::options.set_file_option(), basic::options.set_file_vector_option(), basic::options.set_integer_option(), basic::options.set_integer_vector_option(), basic::options.set_path_option(), basic::options.set_path_vector_option(), basic::options.set_real_option(), basic::options.set_real_vector_option(), utility::options::OptionCollection.set_show_accessed_options_flag(), utility::options::OptionCollection.set_show_unused_options_flag(), basic::options.set_string_option(), basic::options.set_string_vector_option(), Solver.Solve(), numeric::linear_algebra.svdcmp(), rosetta_binders::utility_vector_binder< Vector, L, T, Allocator >.utility_vector_binder(), numeric::geometry.vector_normal_to_ring_plane_of_best_fit(), numeric::geometry::hashing::xyzStripeHash.visit(), numeric::geometry::hashing::xyzStripeHashWithMeta< float >.visit(), numeric::geometry::hashing::xyzStripeHash.visit_lax(), numeric::geometry::hashing::xyzStripeHashWithMeta< float >.visit_lax(), wrap_CXXRecordDecl(), numeric.write_tensor_to_file(), rosetta_binders.xyzVector_add_on_binder(), and basic::TracerImpl.~TracerImpl().