utility::vector1< T, A > Class Template Reference

std::vector with 1-based indexing More...

#include <vector1.hh>

Inheritance diagram for utility::vector1< T, A >:

Public Types
typedef super::value_type	value_type
typedef super::reference	reference
typedef super::const_reference	const_reference
typedef super::pointer	pointer
typedef super::const_pointer	const_pointer
typedef super::iterator	iterator
typedef super::const_iterator	const_iterator
typedef super::reverse_iterator	reverse_iterator
typedef super::const_reverse_iterator	const_reverse_iterator
typedef super::size_type	size_type
typedef super::difference_type	difference_type
typedef super::allocator_type	allocator_type
typedef super::index_type	index_type
typedef super::ssize_type	ssize_type
typedef super::Value	Value
typedef super::Reference	Reference
typedef super::ConstReference	ConstReference
typedef super::Pointer	Pointer
typedef super::ConstPointer	ConstPointer
typedef super::Iterator	Iterator
typedef super::ConstIterator	ConstIterator
typedef super::ReverseIterator	ReverseIterator
typedef super::ConstReverseIterator	ConstReverseIterator
typedef super::Size	Size
typedef super::Difference	Difference
typedef super::Allocator	Allocator
typedef super::Index	Index
typedef super::SSize	SSize
Public Types inherited from utility::vectorL< 1, T, A >
typedef super::value_type	value_type
typedef super::reference	reference
typedef super::const_reference	const_reference
typedef super::pointer	pointer
typedef super::const_pointer	const_pointer
typedef super::iterator	iterator
typedef super::const_iterator	const_iterator
typedef super::reverse_iterator	reverse_iterator
typedef super::const_reverse_iterator	const_reverse_iterator
typedef super::size_type	size_type
typedef super::difference_type	difference_type
typedef super::allocator_type	allocator_type
typedef ::platform::SSize	ssize_type
typedef super::value_type	Value
typedef super::reference	Reference
typedef super::const_reference	ConstReference
typedef super::pointer	Pointer
typedef super::const_pointer	ConstPointer
typedef super::iterator	Iterator
typedef super::const_iterator	ConstIterator
typedef super::reverse_iterator	ReverseIterator
typedef super::const_reverse_iterator	ConstReverseIterator
typedef ::platform::Size	Size
typedef super::difference_type	Difference
typedef super::allocator_type	Allocator
typedef ::platform::SSize	SSize

Public Member Functions
	vector1 (allocator_type const &alloc=allocator_type())
	Default constructor. More...
	vector1 (vector1 const &v)
	Copy constructor. More...
template<ssize_type L_, typename T_ , typename A_ >
	vector1 (vectorL< L_, T_, A_ > const &v)
	Assignable copy constructor. More...
	vector1 (super const &v)
	std::vector constructor More...
template<typename T_ , typename A_ >
	vector1 (std::vector< T_, A_ > const &v)
	Assignable std::vector constructor. More...
	vector1 (size_type num)
	Size constructor. More...
	vector1 (size_type num, value_type const &value, allocator_type const &alloc=allocator_type())
	Uniform value constructor. More...
template<typename InputIterator >
	vector1 (InputIterator const beg, InputIterator const ending, allocator_type const &alloc=allocator_type())
	Iterator range constructor. More...
	vector1 (vector1 &&v)
	C++11 Move constructor. More...
	vector1 (super &&v)
	C++11 vectorL move constructor. More...
	vector1 (std::initializer_list< T > init, const A &alloc=A())
	C++11 initializer list constructor. More...
	~vector1 () override
	Destructor. More...
vector1 &	operator= (vector1 const &v)
	Copy assignment. More...
template<ssize_type L_, typename T_ , typename A_ >
vector1 &	operator= (vectorL< L_, T_, A_ > const &v)
	Assignable copy assignment. More...
vector1 &	operator= (super const &v)
	std::vector assignment More...
template<typename T_ , typename A_ >
vector1 &	operator= (std::vector< T_, A_ > const &v)
	Assignable std::vector assignment. More...
int	index (T const t) const
	Find the index of an element. If not found then return 0;. More...
bool	has_value (T const t) const
	useful function – was commented out previously due, I think, to a conflict with has() in OptionKeys! Now renamed to has_value(). More...
Public Member Functions inherited from utility::vectorL< 1, T, A >
	vectorL (allocator_type const &alloc=allocator_type())
	Default constructor. More...
	vectorL (vectorL const &v)
	Copy constructor. More...
	vectorL (vectorL< L_, T_, A_ > const &v)
	Assignable copy constructor. More...
	vectorL (super const &v)
	std::vector constructor More...
	vectorL (std::vector< T_, A_ > const &v)
	Assignable std::vector constructor. More...
	vectorL (size_type const num)
	Size constructor. More...
	vectorL (size_type const num, value_type const &value, allocator_type const &alloc=allocator_type())
	Uniform value constructor. More...
	vectorL (InputIterator const beg, InputIterator const ending, allocator_type const &alloc=allocator_type())
	Iterator range constructor. More...
	vectorL (vectorL &&v)
	C++11 Move constructor. More...
	vectorL (super &&v)
	C++11 std::vector move constructor. More...
	vectorL (std::initializer_list< T > init, const A &alloc=A())
	C++11 initializer list constructor. More...
virtual	~vectorL ()
	Destructor. More...
vectorL &	operator= (vectorL const &v)
	Copy assignment. More...
vectorL &	operator= (vectorL< L_, T_, A_ > const &v)
	Assignable copy assignment. More...
vectorL &	operator= (super const &v)
	std::vector assignment More...
vectorL &	operator= (std::vector< T_, A_ > const &v)
	Assignable std::vector assignment. More...
super const &	vector () const
	std::vector const explicit conversion More...
super &	vector ()
	std::vector explicit conversion More...
vectorL &	append (vectorL const &v)
	Append another vectorL to the back of the vector. More...
vectorL &	add_back (T const &t)
	Add an element to the back of the vector. More...
vectorL &	remove_back ()
	Remove the element at the back of the vector. More...
vectorL &	pop (T const &t)
	Remove an element of the vector. More...
void	erase_index (index_type const i)
	Deletes the index from the vector. Has same thread-safety/iterator guarantees as std::vector::erase() (That is, it's not safe to access anything past the point of deletion, including the end() iterator.) More...
void	shrink ()
	Shrink the index map to remove unused capacity. More...
bool	contains (T const &t) const
	Check if vector contains a given element. More...
SSize	index_of (T const &t)
	Return the index of a given element or exit if not found. More...
bool	has (index_type const i) const
	Has an element with an index? More...
const_reference	operator[] (index_type const i) const
	vectorL[ i ] const More...
reference	operator[] (index_type const i)
	vectorL[ i ] More...
const_reference	at (index_type const i) const
	vectorL.at( i ) const More...
reference	at (index_type const i)
	vectorL.at( i ) More...
index_type	l () const
	Lower index. More...
index_type	u () const
	Upper index. More...
void	swap (vectorL &v)
	swap( vectorL ) More...

Private Types
typedef vectorL< 1, T, A >	super

Additional Inherited Members
Public Attributes inherited from utility::vectorL< 1, T, A >
typedef	vectorL_IndexSelector< L >
Protected Types inherited from utility::vectorL< 1, T, A >
typedef std::vector< T, A >	root

Detailed Description

template<typename T, typename A = std::allocator< T >>
class utility::vector1< T, A >

std::vector with 1-based indexing

Member Typedef Documentation

template<typename T, typename A = std::allocator< T >>

typedef super::Allocator utility::vector1< T, A >::Allocator

template<typename T, typename A = std::allocator< T >>

typedef super::allocator_type utility::vector1< T, A >::allocator_type

template<typename T, typename A = std::allocator< T >>

typedef super::const_iterator utility::vector1< T, A >::const_iterator

template<typename T, typename A = std::allocator< T >>

typedef super::const_pointer utility::vector1< T, A >::const_pointer

template<typename T, typename A = std::allocator< T >>

typedef super::const_reference utility::vector1< T, A >::const_reference

template<typename T, typename A = std::allocator< T >>

typedef super::const_reverse_iterator utility::vector1< T, A >::const_reverse_iterator

template<typename T, typename A = std::allocator< T >>

typedef super::ConstIterator utility::vector1< T, A >::ConstIterator

template<typename T, typename A = std::allocator< T >>

typedef super::ConstPointer utility::vector1< T, A >::ConstPointer

template<typename T, typename A = std::allocator< T >>

typedef super::ConstReference utility::vector1< T, A >::ConstReference

template<typename T, typename A = std::allocator< T >>

typedef super::ConstReverseIterator utility::vector1< T, A >::ConstReverseIterator

template<typename T, typename A = std::allocator< T >>

typedef super::Difference utility::vector1< T, A >::Difference

template<typename T, typename A = std::allocator< T >>

typedef super::difference_type utility::vector1< T, A >::difference_type

template<typename T, typename A = std::allocator< T >>

typedef super::Index utility::vector1< T, A >::Index

template<typename T, typename A = std::allocator< T >>

typedef super::index_type utility::vector1< T, A >::index_type

template<typename T, typename A = std::allocator< T >>

typedef super::iterator utility::vector1< T, A >::iterator

template<typename T, typename A = std::allocator< T >>

typedef super::Iterator utility::vector1< T, A >::Iterator

template<typename T, typename A = std::allocator< T >>

typedef super::pointer utility::vector1< T, A >::pointer

template<typename T, typename A = std::allocator< T >>

typedef super::Pointer utility::vector1< T, A >::Pointer

template<typename T, typename A = std::allocator< T >>

typedef super::reference utility::vector1< T, A >::reference

template<typename T, typename A = std::allocator< T >>

typedef super::Reference utility::vector1< T, A >::Reference

template<typename T, typename A = std::allocator< T >>

typedef super::reverse_iterator utility::vector1< T, A >::reverse_iterator

template<typename T, typename A = std::allocator< T >>

typedef super::ReverseIterator utility::vector1< T, A >::ReverseIterator

template<typename T, typename A = std::allocator< T >>

typedef super::Size utility::vector1< T, A >::Size

template<typename T, typename A = std::allocator< T >>

typedef super::size_type utility::vector1< T, A >::size_type

template<typename T, typename A = std::allocator< T >>

typedef super::SSize utility::vector1< T, A >::SSize

template<typename T, typename A = std::allocator< T >>

typedef super::ssize_type utility::vector1< T, A >::ssize_type

template<typename T, typename A = std::allocator< T >>

typedef vectorL< 1, T, A > utility::vector1< T, A >::super

private

template<typename T, typename A = std::allocator< T >>

typedef super::Value utility::vector1< T, A >::Value

template<typename T, typename A = std::allocator< T >>

typedef super::value_type utility::vector1< T, A >::value_type

Constructor & Destructor Documentation

template<typename T, typename A = std::allocator< T >>

utility::vector1< T, A >::vector1 ( allocator_type const &  alloc = allocator_type() )

inlineexplicit

Default constructor.

template<typename T, typename A = std::allocator< T >>

utility::vector1< T, A >::vector1 ( vector1< T, A > const &  v )

inline

Copy constructor.

template<typename T, typename A = std::allocator< T >>

template<ssize_type L_, typename T_ , typename A_ >

utility::vector1< T, A >::vector1 ( vectorL< L_, T_, A_ > const &  v )

inline

Assignable copy constructor.

template<typename T, typename A = std::allocator< T >>

utility::vector1< T, A >::vector1 ( super const &  v )

inlineexplicit

std::vector constructor

template<typename T, typename A = std::allocator< T >>

template<typename T_ , typename A_ >

utility::vector1< T, A >::vector1 ( std::vector< T_, A_ > const &  v )

inlineexplicit

Assignable std::vector constructor.

template<typename T, typename A = std::allocator< T >>

utility::vector1< T, A >::vector1 ( size_type  num )

inlineexplicit

Size constructor.

template<typename T, typename A = std::allocator< T >>

utility::vector1< T, A >::vector1 ( size_type  num, value_type const &  value, allocator_type const &  alloc = allocator_type()  )

inline

Uniform value constructor.

template<typename T, typename A = std::allocator< T >>

template<typename InputIterator >

utility::vector1< T, A >::vector1 ( InputIterator const  beg, InputIterator const  ending, allocator_type const &  alloc = allocator_type()  )

inline

Iterator range constructor.

template<typename T, typename A = std::allocator< T >>

utility::vector1< T, A >::vector1 ( vector1< T, A > &&  v )

inline

C++11 Move constructor.

template<typename T, typename A = std::allocator< T >>

utility::vector1< T, A >::vector1 ( super &&  v )

inlineexplicit

C++11 vectorL move constructor.

template<typename T, typename A = std::allocator< T >>

utility::vector1< T, A >::vector1 ( std::initializer_list< T >  init, const A &  alloc = A()  )

inline

C++11 initializer list constructor.

template<typename T, typename A = std::allocator< T >>

utility::vector1< T, A >::~vector1 ( )

inlineoverride

Destructor.

Member Function Documentation

template<typename T, typename A = std::allocator< T >>

bool utility::vector1< T, A >::has_value ( T const  t ) const

inline

useful function – was commented out previously due, I think, to a conflict with has() in OptionKeys! Now renamed to has_value().

Referenced by BuildFullModel::make_built_residues_repulsive(), and simple_packing().

template<typename T, typename A = std::allocator< T >>

int utility::vector1< T, A >::index ( T const  t ) const

inline

Find the index of an element. If not found then return 0;.

Referenced by get_sphere_xyz().

template<typename T, typename A = std::allocator< T >>

vector1& utility::vector1< T, A >::operator= ( vector1< T, A > const &  v )

inline

Copy assignment.

template<typename T, typename A = std::allocator< T >>

template<ssize_type L_, typename T_ , typename A_ >

vector1& utility::vector1< T, A >::operator= ( vectorL< L_, T_, A_ > const &  v )

inline

Assignable copy assignment.

template<typename T, typename A = std::allocator< T >>

vector1& utility::vector1< T, A >::operator= ( super const &  v )

inline

std::vector assignment

template<typename T, typename A = std::allocator< T >>

template<typename T_ , typename A_ >

vector1& utility::vector1< T, A >::operator= ( std::vector< T_, A_ > const &  v )

inline

Assignable std::vector assignment.

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The documentation for this class was generated from the following files:

• src/utility/vector1.fwd.hh
• src/utility/vector1.hh