pyrosetta.bindings.pose.PoseResidueAccessor Class Reference

Inheritance diagram for pyrosetta.bindings.pose.PoseResidueAccessor:

Public Member Functions
def	__init__
def	__len__
def	__iter__
def	__reversed__
def	__getitem__
def	__iadd__
def	__imul__

Public Attributes
	pose

Detailed Description

Accessor wrapper for pose objects providing a collection-like interface.

Constructor & Destructor Documentation

def pyrosetta.bindings.pose.PoseResidueAccessor.__init__	(		self,
			pose
	)

Referenced by pyrosetta.distributed.tasks.taskbase.TaskBase.__setstate__().

Member Function Documentation

def pyrosetta.bindings.pose.PoseResidueAccessor.__getitem__	(		self,
			key
	)

1-based index and slice over residues.

Examples: pose.residues[3], pose.residues[2:6], pose.residues[:-3],
  pose.residues[2:], pose.residues[-1]

References ObjexxFCL.len(), basic::options::OptionKeys::relax::range.range, and pyrosetta.bindings.utility.slice_1base_indicies().

def pyrosetta.bindings.pose.PoseResidueAccessor.__iadd__	(		self,
			other
	)

Short notation for appending a residue to the end of a pose by bond. If the
terminal residue has Cterm variant type, the new appended residue will be
transferred the variant type. If the pose is empty, the residue will be
appended by jump for ease of use.

References ObjexxFCL.len(), PDB_IOBenchmark.pose, ScoreBenchmark.pose, SmallMoverBenchmark.pose, ShearMoverBenchmark.pose, and pyrosetta.bindings.pose.PoseResidueAccessor.pose.

def pyrosetta.bindings.pose.PoseResidueAccessor.__imul__	(		self,
			other
	)

Short notation for appending residues by jump to the terminal residue of a
pose.

References pyrosetta.bindings.utility.bind_property(), and ObjexxFCL.len().

def pyrosetta.bindings.pose.PoseResidueAccessor.__iter__

(

self

)

Iterate over the residues within pose.

References ObjexxFCL.len(), and basic::options::OptionKeys::relax::range.range.

def pyrosetta.bindings.pose.PoseResidueAccessor.__len__

(

self

)

The number of residues in pose.

def pyrosetta.bindings.pose.PoseResidueAccessor.__reversed__

(

self

)

Iterate over the residues within pose in reverse order.
Must provide __reversed__ as accessor object does not support 0-based
indexing for the sequence protocol.

References ObjexxFCL.len(), and basic::options::OptionKeys::relax::range.range.

Member Data Documentation

pyrosetta.bindings.pose.PoseResidueAccessor.pose

Referenced by pyrosetta.bindings.pose.PoseScoreAccessor.__delitem__(), pyrosetta.bindings.pose.PoseResidueAccessor.__iadd__(), pyrosetta.bindings.pose.PoseResidueLabelAccessor.__repr__(), pyrosetta.bindings.pose.PoseScoreAccessor.__setitem__(), pyrosetta.bindings.pose.PoseScoreAccessor.all(), pyrosetta.bindings.pose.PoseScoreAccessor.clear(), pyrosetta.bindings.pose.PoseScoreAccessor.extra(), and pyrosetta.distributed.packed_pose.core.PackedPose.update_scores().

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The documentation for this class was generated from the following file:

• src/python/PyRosetta/src/pyrosetta/bindings/pose.py