Restrict the palette of ResidueTypes to those with the given properties. More...

#include <TaskOperations.hh>

Inheritance diagram for core::pack::task::operation::RestrictToResidueProperties:

Public Types
typedef TaskOperation	parent

Public Types inherited from core::pack::task::operation::TaskOperation
typedef utility::tag::TagCOP	TagCOP

typedef basic::datacache::DataMap	DataMap

typedef pose::Pose	Pose

Public Member Functions
	RestrictToResidueProperties ()
	BEGIN RestrictToResidueProperties. More...

	RestrictToResidueProperties (RestrictToResidueProperties const &object_to_copy)

	RestrictToResidueProperties (utility::vector1< core::chemical::ResidueProperty > const &properties)

	RestrictToResidueProperties (utility::vector1< core::chemical::ResidueProperty > const &properties, core::select::residue_selector::ResidueSelectorCOP selector)

	~RestrictToResidueProperties () override=default

TaskOperationOP	clone () const override
	Create another task operation of the type matching the most-derived version of the class. More...

void	apply (pose::Pose const &pose, PackerTask &task) const override
	Change a packer task in some way. The input pose is the one to which the input task will be later applied. More...

void	parse_tag (TagCOP tag, DataMap &map) override
	Used to parse an xml-like tag to load parameters and properties. More...

void	set_properties (utility::vector1< core::chemical::ResidueProperty > const &properties)

utility::vector1 < core::chemical::ResidueProperty > const &	properties () const

void	set_selector (core::select::residue_selector::ResidueSelectorCOP selector)

core::select::residue_selector::ResidueSelectorCOP	selector () const

Public Member Functions inherited from core::pack::task::operation::TaskOperation
	~TaskOperation () override

virtual bool	task_operation_provides_citation_info () const
	Does this task operation provide information about how to cite it? More...

virtual utility::vector1 < basic::citation_manager::CitationCollectionCOP >	provide_citation_info () const
	Provide the citation. More...

virtual bool	task_operation_is_unpublished () const
	Does this task_operation indicate that it is unpublished (and, by extension, that the author should be included in publications resulting from it)? More...

virtual utility::vector1 < basic::citation_manager::UnpublishedModuleInfoCOP >	provide_authorship_info_for_unpublished () const
	Provide a list of authors and their e-mail addresses, as strings. More...

Static Public Member Functions
static std::string	keyname ()

static utility::tag::AttributeList	xml_schema_attributes ()

static void	provide_xml_schema (utility::tag::XMLSchemaDefinition &xsd)

Private Attributes
utility::vector1 < core::chemical::ResidueProperty >	properties_

core::select::residue_selector::ResidueSelectorCOP	selector_

Detailed Description

Restrict the palette of ResidueTypes to those with the given properties.

Author: Labonte JWLab.nosp@m.onte.nosp@m.@jhu..nosp@m.edu

Member Typedef Documentation

typedef TaskOperation core::pack::task::operation::RestrictToResidueProperties::parent

Constructor & Destructor Documentation

core::pack::task::operation::RestrictToResidueProperties::RestrictToResidueProperties ( )

BEGIN RestrictToResidueProperties.

core::pack::task::operation::RestrictToResidueProperties::RestrictToResidueProperties ( RestrictToResidueProperties const & object_to_copy )

References properties_, and selector_.

core::pack::task::operation::RestrictToResidueProperties::RestrictToResidueProperties ( utility::vector1< core::chemical::ResidueProperty > const & properties )

core::pack::task::operation::RestrictToResidueProperties::RestrictToResidueProperties	(	utility::vector1< core::chemical::ResidueProperty > const &	properties,
		core::select::residue_selector::ResidueSelectorCOP	selector
	)

core::pack::task::operation::RestrictToResidueProperties::~RestrictToResidueProperties ( )

overridedefault

Member Function Documentation

void core::pack::task::operation::RestrictToResidueProperties::apply	(	pose::Pose const &	,
		PackerTask &
	)		const

overridevirtual

Change a packer task in some way. The input pose is the one to which the input task will be later applied.

Implements core::pack::task::operation::TaskOperation.

References core::pack::task::PackerTask::nonconst_residue_task(), properties_, core::pack::task::ResidueLevelTask::restrict_to_restypes_with_all_properties(), selector_, and core::pose::Pose::size().

TaskOperationOP core::pack::task::operation::RestrictToResidueProperties::clone ( ) const

overridevirtual

Create another task operation of the type matching the most-derived version of the class.

Implements core::pack::task::operation::TaskOperation.

std::string core::pack::task::operation::RestrictToResidueProperties::keyname ( )

static

Referenced by core::pack::task::operation::RestrictToResiduePropertiesCreator::keyname(), and provide_xml_schema().

void core::pack::task::operation::RestrictToResidueProperties::parse_tag	(	TagCOP	tag,
		DataMap &
	)

overridevirtual

Used to parse an xml-like tag to load parameters and properties.

Reimplemented from core::pack::task::operation::TaskOperation.

References protocols::pack_daemon::error_message, core::chemical::ResidueProperties::get_property_from_string(), core::chemical::NO_PROPERTY, properties_, selector_, and set_selector().

utility::vector1< core::chemical::ResidueProperty > const& core::pack::task::operation::RestrictToResidueProperties::properties ( ) const

inline

References properties_.

Referenced by set_properties().

void core::pack::task::operation::RestrictToResidueProperties::provide_xml_schema ( utility::tag::XMLSchemaDefinition & xsd )

static

References keyname(), core::pack::task::operation::task_op_schema_w_attributes(), and xml_schema_attributes().

Referenced by core::pack::task::operation::RestrictToResiduePropertiesCreator::provide_xml_schema().

core::select::residue_selector::ResidueSelectorCOP core::pack::task::operation::RestrictToResidueProperties::selector ( ) const

inline

References selector_.

void core::pack::task::operation::RestrictToResidueProperties::set_properties ( utility::vector1< core::chemical::ResidueProperty > const & properties )

inline

References properties(), and properties_.

void core::pack::task::operation::RestrictToResidueProperties::set_selector ( core::select::residue_selector::ResidueSelectorCOP selector )

References selector_.

Referenced by parse_tag().

utility::tag::AttributeList core::pack::task::operation::RestrictToResidueProperties::xml_schema_attributes ( )

static

Referenced by provide_xml_schema().