Designates a filter that can be passed multiple poses by the VectorPoseJobDistributor Any filters deriving from this subclass can then act on all of the input poses simultaneously Only accessible through recon application. More...

#include <VectorPoseFilter.hh>

Inheritance diagram for protocols::filters::VectorPoseFilter:

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Public Member Functions
	VectorPoseFilter ()
	Constructor. More...

	~VectorPoseFilter () override

	VectorPoseFilter (std::string const &name)

	VectorPoseFilter (VectorPoseFilter const &other)

bool	apply (core::pose::Pose const &pose) const override=0
	Returns true if the given pose passes the filter, false otherwise. More...

virtual bool	apply_mpi (core::pose::Pose const &pose) const =0
	Apply function to run under MPI. More...

void	set_poses (utility::vector1< core::pose::PoseOP > const &poses)
	Set the vector of poses for the mover to act upon. More...

Public Member Functions inherited from protocols::filters::Filter
	Filter ()

	Filter (std::string const &)

	Filter (Filter const &)

	~Filter () override

virtual void	report (std::ostream &, core::pose::Pose const &) const

virtual core::Real	report_sm (core::pose::Pose const &) const
	used to report filter internals through a score or silent file More...

virtual std::string	get_type () const

std::string	get_user_defined_name () const

void	set_user_defined_name (std::string const &name)

virtual void	clear ()
	used to clear internal variables if needed. Using fresh_instance is preferred since it's a pure virtual More...

virtual void	parse_my_tag (utility::tag::TagCOP, basic::datacache::DataMap &, Filters_map const &, moves::Movers_map const &, core::pose::Pose const &)

virtual FilterOP	clone () const =0

virtual FilterOP	fresh_instance () const =0

virtual core::Real	score (core::pose::Pose &pose)

virtual std::string	name () const

virtual bool	filter_provides_citation_info () const
	Does this filter provide information about how to cite it? More...

virtual utility::vector1 < basic::citation_manager::CitationCollectionCOP >	provide_citation_info () const
	Provide the citation. More...

virtual bool	filter_is_unpublished () const
	Does this filter indicate that it is unpublished (and, by extension, that the author should be included in publications resulting from it)? More...

virtual utility::vector1 < basic::citation_manager::UnpublishedModuleInfoCOP >	provide_authorship_info_for_unpublished () const
	Provide a list of authors and their e-mail addresses, as strings. More...

Protected Attributes
utility::vector1 < core::pose::PoseOP >	poses_

Protected Attributes inherited from protocols::filters::Filter
std::string	scorename_

Detailed Description

Designates a filter that can be passed multiple poses by the VectorPoseJobDistributor Any filters deriving from this subclass can then act on all of the input poses simultaneously Only accessible through recon application.

Constructor & Destructor Documentation

protocols::filters::VectorPoseFilter::VectorPoseFilter ( )

Constructor.

protocols::filters::VectorPoseFilter::~VectorPoseFilter ( )

override

protocols::filters::VectorPoseFilter::VectorPoseFilter ( std::string const & name )

protocols::filters::VectorPoseFilter::VectorPoseFilter ( VectorPoseFilter const & other )

Member Function Documentation

bool protocols::filters::VectorPoseFilter::apply ( core::pose::Pose const & pose ) const

overridepure virtual

Returns true if the given pose passes the filter, false otherwise.

Implements protocols::filters::Filter.

Implemented in protocols::recon_design::FitnessFilter.

virtual bool protocols::filters::VectorPoseFilter::apply_mpi ( core::pose::Pose const & pose ) const

pure virtual

Apply function to run under MPI.

Implemented in protocols::recon_design::FitnessFilter.

Referenced by protocols::jd2::VectorPoseJobDistributor::apply_parsed_protocol_mpi().

void protocols::filters::VectorPoseFilter::set_poses ( utility::vector1< core::pose::PoseOP > const & poses )

Set the vector of poses for the mover to act upon.

References poses_.

Referenced by protocols::jd2::VectorPoseJobDistributor::apply_parsed_protocol_serial().

Member Data Documentation

utility::vector1< core::pose::PoseOP > protocols::filters::VectorPoseFilter::poses_

protected

Referenced by protocols::recon_design::FitnessFilter::calculate_fitness(), and set_poses().

The documentation for this class was generated from the following files:

src/protocols/filters/VectorPoseFilter.hh
src/protocols/filters/VectorPoseFilter.cc

Public Member Functions

Protected Attributes

Detailed Description

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation