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Rosetta
2020.11
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BFactor score counts identical residues. More...
#include <BFactor.hh>
Public Member Functions | |
BFactor (core::Size priority, core::Real lowest_acceptable_value, bool use_lowest, std::string &) | |
bool | score (FragmentCandidateOP f, FragmentScoreMapOP empty_map) override |
bool | describe_score (FragmentCandidateOP f, FragmentScoreMapOP empty_map, std::ostream &out) |
prints a detailed explanation how a fragment score has been computed More... | |
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FragmentScoringMethod (core::Size priority, core::Real lowest_acceptable_value, bool use_lowest, std::string name) | |
std::string & | get_score_name () |
Returns a name of this scoring method. More... | |
core::Size | get_id () |
Returns an integer index assigned to this scoring method by a scoring manager. More... | |
void | set_id (core::Size id) |
Sets a new integer index for this scoring method. More... | |
core::Size | get_priority () |
Returns a priority of this scoring method. More... | |
core::Real | get_min_allowed_score () |
Returns the lowest acceptable score value for this scoring method. More... | |
bool | get_use_lowest () |
Returns the boolean choice on using the above lowest acceptable score value. More... | |
void | set_min_allowed_score (core::Real lowest_acceptable_value) |
Sets a new value of the lowest acceptable score. More... | |
Additional Inherited Members | |
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core::Size | id_ |
core::Size | priority_ |
std::string | name_ |
core::Real | lowest_acceptable_value_ |
bool | use_lowest_ |
BFactor score counts identical residues.
Resulting score is the number of identical residues on corresponding positions in a vall fragment and a query sequence
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inline |
bool protocols::frag_picker::scores::BFactor::describe_score | ( | FragmentCandidateOP | f, |
FragmentScoreMapOP | empty_map, | ||
std::ostream & | out | ||
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prints a detailed explanation how a fragment score has been computed
besides extensive output, the method should return the same result as score()
References core::chemical::element::I.
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overridevirtual |