Rosetta
3.8
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Classes | |
class | VIP_Mover |
class | VIP_Report |
Functions | |
static THREAD_LOCAL basic::Tracer | TR ("VIP") |
bool | are_seqs_different (core::pose::Pose &p1, core::pose::Pose &p2) |
std::string | base_name (const std::string &str) |
std::string | get_out_tag (std::string fname) |
core::Real | output_packstat (core::pose::Pose &pose) |
void | set_local_movemap (core::pose::Pose &pose, core::Size position, core::kinematics::MoveMapOP mmap) |
bool protocols::vip::are_seqs_different | ( | core::pose::Pose & | p1, |
core::pose::Pose & | p2 | ||
) |
std::string protocols::vip::base_name | ( | const std::string & | str | ) |
References core::sequence::end.
Referenced by protocols::jd2::JobOutputter::affixed_numbered_name(), core::io::pose_to_sfr::PoseToStructFileRepConverter::append_residue_info_to_sfr(), protocols::simple_moves::hbs::HbsPatcher::apply(), protocols::simple_moves::a3b_hbs::A3BHbsPatcher::apply(), protocols::hybridization::CartesianSampler::apply(), protocols::ligand_docking::StartFrom::apply(), protocols::electron_density::DockIntoDensityMover::apply_multi(), core::io::pdb::create_records_from_sfr(), core::chemical::ResidueTypeFinder::filter_by_residue_type_base_name(), protocols::residue_optimization::MetapatchEnumeration::generate_derived_types(), protocols::simple_moves::chiral::get_chiral_residue_type(), get_out_tag(), core::chemical::ResidueTypeSet::get_residue_type_with_variant_added(), core::chemical::ResidueTypeSet::get_residue_type_with_variant_removed(), core::chemical::residue_type_base_name(), and core::pose::Pose::virtual_to_real().
std::string protocols::vip::get_out_tag | ( | std::string | fname | ) |
References base_name().
core::Real protocols::vip::output_packstat | ( | core::pose::Pose & | pose | ) |
Referenced by protocols::vip::VIP_Report::get_GOE_packstat_report().
void protocols::vip::set_local_movemap | ( | core::pose::Pose & | pose, |
core::Size | position, | ||
core::kinematics::MoveMapOP | mmap | ||
) |
References core::pose::Pose::energies(), and core::scoring::Energies::energy_graph().
Referenced by protocols::vip::VIP_Mover::relax_favorable_poses().
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