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Wang C, Bradley P, Baker D (2007)
Protein-protein docking with backbone flexibility.
J Mol Biol 373:503-19 -
London N, Schueler-Furman O (2007)
Assessing the energy landscape of CAPRI targets by FunHunt.
Proteins 69:809-15 -
Das R, Baker D (2007)
Automated de novo prediction of native-like RNA tertiary structures.
Proc Natl Acad Sci U S A 104:14664-9 -
Humphris EL, Kortemme T (2007)
Design of multi-specificity in protein interfaces.
PLoS Comput Biol 3:e164 -
Lengyel CS, Willis LJ, Mann P, Baker D, Kortemme T, Strong RK, McFarland BJ (2007)
Mutations designed to destabilize the receptor-bound conformation increase MICA-NKG2D association rate and affinity.
J Biol Chem 282:30658-66 -
Sammond DW, Eletr ZM, Purbeck C, Kimple RJ, Siderovski DP, Kuhlman B (2007)
Structure-based protocol for identifying mutations that enhance protein-protein binding affinities.
J Mol Biol 371:1392-404 -
Aprikian P, Tchesnokova V, Kidd B, Yakovenko O, Yarov-Yarovoy V, Trinchina E, Vogel V, Thomas W, Sokurenko E (2007)
Interdomain interaction in the FimH adhesin of Escherichia coli regulates the affinity to mannose.
J Biol Chem 282:23437-46 -
Meitzler JL, Gray JJ, Hendrickson TL (2007)
Truncation of the caspase-related subunit (Gpi8p) of Saccharomyces cerevisiae GPI transamidase: dimerization revealed.
Arch Biochem Biophys 462:83-93 -
Eletr ZM, Kuhlman B (2007)
Sequence determinants of E2-E6AP binding affinity and specificity.
J Mol Biol 369:419-28 -
Pham Y, Li L, Kim A, Erdogan O, Weinreb V, Butterfoss GL, Kuhlman B, Carter CW Jr (2007)
A minimal TrpRS catalytic domain supports sense/antisense ancestry of class I and II aminoacyl-tRNA synthetases.
Mol Cell 25:851-62