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Pubs
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Kortemme T, Joachimiak LA, Bullock AN, Schuler AD, Stoddard BL, Baker D (2004)
Computational redesign of protein-protein interaction specificity.
Nat Struct Mol Biol 11:371-9 -
Kortemme T, Kim DE, Baker D (2004)
Computational alanine scanning of protein-protein interfaces.
Sci STKE 2004:pl2 -
Kuhn M, Meiler J, Baker D (2004)
Strand-loop-strand motifs: prediction of hairpins and diverging turns in proteins.
Proteins 54:282-8 -
Hazbun TR, Malmström L, Anderson S, Graczyk BJ, Fox B, Riffle M, Sundin BA, Aranda JD, McDonald WH, Chiu CH, Snydsman BE, Bradley P, Muller EG, Fields S, Baker D, Yates JR 3rd, Davis TN (2003)
Assigning function to yeast proteins by integration of technologies.
Mol Cell 12:1353-65 -
Meiler J, Baker D (2003)
Rapid protein fold determination using unassigned NMR data.
Proc Natl Acad Sci U S A 100:15404-9 -
Kuhlman B, Dantas G, Ireton GC, Varani G, Stoddard BL, Baker D (2003)
Design of a novel globular protein fold with atomic-level accuracy.
Science 302:1364-8 -
Malmström J, Larsen K, Malmström L, Tufvesson E, Parker K, Marchese J, Williamson B, Patterson D, Martin S, Juhasz P, Westergren-Thorsson G, Marko-Varga G (2003)
Nanocapillary liquid chromatography interfaced to tandem matrix-assisted laser desorption/ionization and electrospray ionization-mass spectrometry: mapping the nuclear proteome of human fibroblasts.
Electrophoresis 24:3806-14 -
Chivian D, Kim DE, Malmström L, Bradley P, Robertson T, Murphy P, Strauss CE, Bonneau R, Rohl CA, Baker D (2003)
Automated prediction of CASP-5 structures using the Robetta server.
Proteins 53 Suppl 6:524-33 -
Bradley P, Chivian D, Meiler J, Misura KM, Rohl CA, Schief WR, Wedemeyer WJ, Schueler-Furman O, Murphy P, Schonbrun J, Strauss CE, Baker D (2003)
Rosetta predictions in CASP5: successes, failures, and prospects for complete automation.
Proteins 53 Suppl 6:457-68 -
Meiler J, Baker D (2003)
Coupled prediction of protein secondary and tertiary structure.
Proc Natl Acad Sci U S A 100:12105-10