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Chemically Modified Residues

Energy minimization of a crystal structure with residues mutated in pymol

Chemically Modified Residues


I am working on a protein structure which contains a modified amino acid (lysine covalently bound to pyridoxal phosphate). I mutated some amino acids in the crystal structure using Pymol. Now, I want to perform energy minimization of the entire structure. But I get an error due to the modified lysine. What shall I do ??


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