pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask Class Reference

Inheritance diagram for pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask:

Public Member Functions
def	parser
def	__init__
def	setup
def	parsed_protocol
def	execute
Public Member Functions inherited from pyrosetta.distributed.tasks.taskbase.TaskBase
def	__repr__
def	__name__
def	__getstate__
def	__setstate__
def	maybe_setup
def	setup
def	execute
def	__call__
Public Member Functions inherited from pyrosetta.distributed.utility.log.LoggerMixin
def	logger

Public Attributes
	default_options
	tag
	protocol_lock
Public Attributes inherited from pyrosetta.distributed.tasks.taskbase.TaskBase
	is_setup

Static Public Attributes
tuple	protocol_xml = traitlets.CUnicode()

Constructor & Destructor Documentation

def pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask.__init__	(		self,
			protocol_xml
	)

Referenced by pyrosetta.distributed.tasks.taskbase.TaskBase.__setstate__().

Member Function Documentation

def pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask.execute	(		self,
			pack_or_pose
	)

References PackingAngle.apply(), pyrosetta.distributed.viewer.modules.setBackgroundColor.apply(), IAMover.apply(), pyrosetta.distributed.tasks.rosetta_scripts.MultioutputRosettaScriptsTask.apply(), Minimize.apply(), IdentifyCDRClusters.apply(), ViewMembraneProteinMover.apply(), zinc1_homodimer_setup.apply(), LigandRepackMinimizeProtocol.apply(), ExtractATD.apply(), MetalSiteFinderMover.apply(), test.Workshop9_my_shapes.PhiNByXDegreesMover.apply(), pyrosetta.distributed.tasks.rosetta_scripts.SingleoutputRosettaScriptsTask.apply(), MyScoreMover.apply(), AnchorFinderMover.apply(), pyrosetta.distributed.viewer.modules.setDisulfides.apply(), DummyMover.apply(), RmsfMover.apply(), NCMinimize.apply(), test.T850_SubClassing.My_New_Mover.apply(), zinc2_homodimer_design.apply(), zinc1_homodimer_design.apply(), APDBCMover.apply(), ExposedStrandMover.apply(), FitMover.apply(), HDdesignMover.apply(), zinc2_homodimer_setup.apply(), HDmakerMover.apply(), BacksideHbondFinderMover.apply(), ExemplarMover.apply(), HbsDesignMover.apply(), PeptoidDesignMover.apply(), OopDesignMover.apply(), CaToAllAtom.apply(), MPDomainAssembly.apply(), GlycanClashCheckMover.apply(), supercharge.apply(), LigandDockBench.apply(), pyrosetta.distributed.viewer.modules.setHydrogenBonds.apply(), DockGlycansProtocol.apply(), DougsDockDesignMinimizeMagicMover.apply(), HBondReporter.apply(), pyrosetta.distributed.viewer.modules.setHydrogens.apply(), RNA_ScoreMover.apply(), PhProtocol.apply(), numeric::BodyPosition< typename >.apply(), BodyPosition< T >.apply(), pyrosetta.distributed.viewer.modules.setStyle.apply(), UBQ_GTPase_disulfide_Mover.apply(), numeric::Quaternion< T >.apply(), Quaternion< numeric::Real >.apply(), Quaternion< Real >.apply(), numeric::Quaternion< typename >.apply(), pyrosetta.distributed.viewer.modules.setSurface.apply(), UBQ_E2Mover.apply(), pyrosetta.distributed.viewer.modules.setZoom.apply(), and pyrosetta.distributed.viewer.modules.setZoomTo.apply().

def pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask.parsed_protocol

(

self

)

References pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask.default_options, and pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask.tag.

Referenced by pyrosetta.distributed.tasks.rosetta_scripts.MultioutputRosettaScriptsTask.apply(), and pyrosetta.distributed.tasks.rosetta_scripts.SingleoutputRosettaScriptsTask.apply().

def pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask.parser

(

self

)

def pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask.setup

(

self

)

Referenced by pyrosetta.distributed.tasks.taskbase.TaskBase.maybe_setup().

Member Data Documentation

pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask.default_options

Referenced by pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask.parsed_protocol().

pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask.protocol_lock

Referenced by pyrosetta.distributed.tasks.rosetta_scripts.MultioutputRosettaScriptsTask.apply(), pyrosetta.distributed.tasks.rosetta_scripts.SingleoutputRosettaScriptsTask.apply(), and pyrosetta.distributed.tasks.score.ScorePoseTask.execute().

tuple pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask.protocol_xml = traitlets.CUnicode()

static

pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask.tag

Referenced by pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask.parsed_protocol().

---

The documentation for this class was generated from the following file:

• src/python/PyRosetta/src/pyrosetta/distributed/tasks/rosetta_scripts.py