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Rosetta
2020.11
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Public Member Functions | |
def | __init__ |
def | apply |
Public Attributes | |
color | |
radius | |
Display disulfide bonds according to `pyrosetta.rosetta.core.conformation.is_disulfide_bond()` for all combinations of cysteine residues in each initialized `.pdb` file, `Pose` or `PackedPose` object. Parameters ---------- first : optional `color` `str` indicating a standard color (e.g. "black"). Default: "gold" second : optional `radius` `float` or `int` indicating the radius of the stick connecting the atoms participating in each disulfide bond. Default: 0.5 Returns ------- A Viewer instance.
def pyrosetta.distributed.viewer.modules.setDisulfides.__init__ | ( | self, | |
color = "gold" , |
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radius = 0.5 |
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Referenced by pyrosetta.distributed.tasks.taskbase.TaskBase.__setstate__().
def pyrosetta.distributed.viewer.modules.setDisulfides.apply | ( | self, | |
viewer, | |||
pose, | |||
pdbstring | |||
) |
References pyrosetta.distributed.viewer.modules._pdbstring_to_pose(), pyrosetta.distributed.viewer.modules.setBackgroundColor.color, pyrosetta.distributed.viewer.modules.setDisulfides.color, basic::options::OptionKeys::stepwise.enumerate, pyrosetta.distributed.viewer.modules.setDisulfides.radius, and basic::sampling::orientations::QuatDBMetadata.radius.
Referenced by pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask.execute().
pyrosetta.distributed.viewer.modules.setDisulfides.color |
pyrosetta.distributed.viewer.modules.setDisulfides.radius |