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Error about rifdocking

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Error about rifdocking

Hello, everyone I prepared paper_interface_design_pilot_commands. List when I did RIFdocking step 12 Running a pilot job. When I ran the commands, the error occurred: Database file opened: scoring/score_functions/sap_sasa_calib.dat
WARNING!! DALPHABALL output nan at index 140724834832176
DALPHABALL output indicies not matching! 1!=140724834832176

ERROR:: Exit from: src/core/scoring/packing/ line: 170
protocols.rosetta_scripts.ParsedProtocol: [ ERROR ] Exception while processing procotol: 

File: src/core/scoring/packing/
[ ERROR ] UtilityExitException

This is my design flag:

-script_vars patchdock_res=51,53,55,76,79,80,82,85,87
-script_vars runpsipred_single=/home/gaon/biosoftware/psipred/runpsipred_single
-dalphaball /home/gaon/biosoftware/rosetta39/main/source/external/DAlpahBall
-indexed_structure_store:fragment_store /home/gaon/cao_protocol/ss_grouped_vall_all.h5
#-dunbrack_prob_buried 0.8
#-dunbrack_prob_nonburied 0.8
#-dunbrack_prob_buried_semi 0.8
#-dunbrack_prob_nonburied_semi 0.8

I used Dalphaball rosetta3.9 version is because when I compiled Dalphball in rosetta3.13 version, it produced the multiple definition error. My gcc version is 11.4.

Has anyone encountered this error with Rosetta? How can I solve this problem? I'd be grateful if you could give me any help.

This is rosetta_Crash log.157.52 KB
Post Situation: 
Mon, 2024-01-08 16:21
Tue, 2024-01-09 08:03