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Problems with Cterm_amidation.txt by helenah » Thu, 2020-10-08 04:52 |
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5,204 |
by helenah Tue, 2020-11-03 04:33 |
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using constraints with AbinitioRelax (Rosetta 3.1) by ndousis » Fri, 2009-12-18 08:56 |
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8,746 |
by ndousis Mon, 2014-04-21 06:47 |
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Resfile by vijayaraj81 » Thu, 2014-02-27 01:14 |
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8,987 |
by vijayaraj81 Tue, 2014-03-04 05:07 |
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ETABLE constraint function type by allan.ferrari » Tue, 2017-01-10 08:01 |
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6,449 |
by smlewis Sun, 2017-01-15 18:14 |
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talaris2013 energy terms modifications by peony » Sat, 2013-11-23 02:48 |
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16,898 |
by rmoretti Mon, 2014-04-21 06:48 |
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RosettaVIP by nick.polizzi » Tue, 2013-08-06 15:13 |
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7,739 |
by rmoretti Mon, 2014-04-21 06:48 |
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loop remodelling with a fixed bound DNA by jtmacd » Thu, 2010-02-25 03:23 |
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6,597 |
by jtmacd Mon, 2014-04-21 06:47 |
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Every thing Ok in PC end Error on Server by jrcf » Tue, 2016-03-22 07:21 |
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7,976 |
by jrcf Wed, 2016-03-23 12:16 |
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building a 77 aa long protein fragment by tevang » Sat, 2010-02-20 11:37 |
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7,585 |
by gsmurphy Mon, 2014-04-21 06:47 |
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Rosetta3 Tutorials by smlewis » Fri, 2011-11-18 07:33 |
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17,438 |
by rmoretti Tue, 2019-07-09 10:24 |
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can't access rosetta commercial license download via given URL from CoMotion by y_atsmonraz » Tue, 2023-02-14 11:04 |
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1,817 |
by rmoretti Thu, 2023-02-16 13:48 |
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Rosetta job distribution error by ss » Thu, 2019-08-01 09:26 |
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5,813 |
by ac.research Mon, 2020-02-10 08:19 |
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Debugging Rosetta under XCode by sacch » Sun, 2011-10-16 18:23 |
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8,392 |
by sacch Mon, 2014-04-21 06:47 |
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Looking for a pdb.... by MarkW » Mon, 2014-10-13 15:45 |
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8,336 |
by rmoretti Mon, 2014-11-03 16:30 |
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memory issue rosetta3.4 scripts by ast » Mon, 2013-01-28 06:25 |
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9,926 |
by smlewis Mon, 2014-04-21 06:47 |
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Docking + Active Site Design by bharat_46010 » Sat, 2014-12-13 23:04 |
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8,512 |
by rmoretti Wed, 2015-01-21 08:43 |
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Rosetta3 Tutorials Beta Release by smlewis » Fri, 2011-08-19 13:35 |
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7,740 |
by smlewis Mon, 2014-04-21 06:47 |
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Loop Modeling Deletes Residues by Julix » Wed, 2012-09-05 10:14 |
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6,887 |
by smlewis Mon, 2014-04-21 06:47 |
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log files by shadrinams » Fri, 2018-01-26 07:29 |
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6,973 |
by shadrinams Mon, 2018-02-12 11:47 |
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Is the packer aware of non canonical amino acids? by krdav » Tue, 2016-08-16 08:16 |
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6,570 |
by krdav Wed, 2016-08-17 12:57 |
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about Residue Number in Rosetta by jiongzhang » Mon, 2012-06-11 14:58 |
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10,535 |
by smlewis Mon, 2014-04-21 06:47 |
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How to deal with Cu-as a ligand or as part of the receptor? by hanypao » Fri, 2011-09-30 18:50 |
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10,433 |
by rmoretti Mon, 2014-04-21 06:47 |
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best_ifaceE.py error by rosa » Fri, 2013-07-12 08:35 |
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6,758 |
by rosa Mon, 2014-04-21 06:48 |
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A question about Multiple constraints by kxiao » Mon, 2014-06-16 07:02 |
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7,384 |
by masterofpuppets Fri, 2014-12-19 08:30 |
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Question on eval_atom_derivative function. by Al52 » Thu, 2015-12-03 16:17 |
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6,871 |
by rmoretti Thu, 2016-02-04 09:29 |
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Using D-amino acids in Rosetta docking by moehle » Wed, 2011-06-01 00:49 |
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8,593 |
by moehle Mon, 2014-04-21 06:47 |
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Reproducing Rosetta++ scoring function with Rosetta 3? by JuliusSu » Mon, 2014-03-17 21:15 |
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7,356 |
by JuliusSu Wed, 2014-03-19 20:38 |
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Antibody homology modeling fails after blastp by sunhwan » Sat, 2017-02-18 11:25 |
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6,158 |
by sunhwan Mon, 2017-02-27 11:02 |
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How does one prevent Rosetta from connecting two separate chains? by jhbrown » Thu, 2011-12-15 14:08 |
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6,971 |
by Anonymous Mon, 2014-04-21 06:47 |
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General Protein Folding Question by twopint23oz » Sun, 2012-04-01 22:57 |
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6,518 |
by smlewis Mon, 2014-04-21 06:47 |
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AbinitioRelax using multiple cores on a single machine without mpi? by JoG » Tue, 2011-10-25 00:40 |
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11,851 |
by smlewis Mon, 2014-04-21 06:47 |
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rerun same experiment on MPI. by exchhattu » Tue, 2010-02-23 21:14 |
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7,100 |
by exchhattu Mon, 2014-04-21 06:47 |
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how to transfer the rosetta score to physical unit? by Lindsay » Thu, 2012-06-28 09:33 |
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8,072 |
by Lindsay Mon, 2014-04-21 06:47 |
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relax structure before design? by Lindsay » Tue, 2013-11-05 20:50 |
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9,993 |
by rmoretti Mon, 2014-04-21 06:48 |
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Error when renumbering PDB by dzhao » Wed, 2012-07-18 01:03 |
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9,390 |
by rmoretti Mon, 2014-04-21 06:47 |
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hydrophobicity patch by Lindsay » Fri, 2012-05-04 08:24 |
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9,241 |
by Lindsay Mon, 2014-04-21 06:47 |
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Rosetta (antibody_designer) performance by Kihang _Youn » Wed, 2022-03-02 00:48 |
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2,578 |
by Kihang _Youn Thu, 2022-03-10 16:30 |
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errors while running rosetta 3.1 by isengupta13 » Tue, 2011-05-17 18:11 |
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7,838 |
by jurkm Mon, 2014-04-21 06:47 |
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ERROR READING PDB FILE by asmi » Sat, 2011-02-26 07:23 |
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8,861 |
by smlewis Mon, 2014-04-21 06:47 |
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How to input constraints? by violetsha7 » Wed, 2009-05-13 00:13 |
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9,356 |
by smlewis Mon, 2014-04-21 06:47 |
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cutpoint error! by monos_morpheus » Thu, 2011-04-07 08:04 |
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7,781 |
by monos_morpheus Mon, 2014-04-21 06:47 |
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how to optimize the weights? by Lindsay » Tue, 2012-04-10 07:40 |
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6,363 |
by rmoretti Mon, 2014-04-21 06:47 |
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Rosetta3.3 enzyme_design errors by jtmacd » Wed, 2012-01-25 03:33 |
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8,046 |
by rmoretti Mon, 2014-04-21 06:47 |
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Help with get_pdb.py for PDB file cleaning by lzx32 » Mon, 2011-03-28 02:11 |
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9,056 |
by smlewis Mon, 2014-04-21 06:47 |
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Talaris score function by nawsad » Tue, 2013-05-21 03:32 |
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8,887 |
by rmoretti Mon, 2014-04-21 06:47 |
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Structure refinement guided by Cryo-EM density maps by ahmadkhalifa » Thu, 2018-03-08 08:22 |
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6,811 |
by ahmadkhalifa Tue, 2018-05-01 09:04 |
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Error running Abinitio relax with @flags by samuelrpita » Mon, 2015-10-05 13:20 |
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7,950 |
by rmoretti Tue, 2015-10-27 09:11 |
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'-norepack_disulf' flag NOT work in Ligand-protein docking ? by darlintai » Tue, 2011-01-11 22:21 |
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6,302 |
by smlewis Mon, 2014-04-21 06:47 |
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Energy Calculation in Rosetta3.4 by sdg_lab » Thu, 2012-04-12 04:49 |
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11,512 |
by rmoretti Mon, 2014-04-21 06:47 |
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SASA packing score in Rosetta 3.1 by enoee » Wed, 2010-07-28 01:45 |
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6,847 |
by smlewis Mon, 2014-04-21 06:47 |
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Linker problems when building mini by assaff » Mon, 2009-10-12 01:07 |
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5,612 |
by smlewis Mon, 2014-04-21 06:47 |
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two questions about "Prepare structures for use in Rosetta" by Anonymous » Wed, 2012-06-06 08:13 |
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6,060 |
by Anonymous Mon, 2014-04-21 06:47 |
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mitochondria protein modeling by rlwoltz » Fri, 2012-10-26 14:32 |
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6,907 |
by smlewis Mon, 2014-04-21 06:47 |
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what rotamer lib is used in rosetta3.5? by Lindsay » Thu, 2014-02-06 16:11 |
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6,454 |
by rmoretti Fri, 2014-03-28 09:03 |
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Add a ligand with only one atom (i.e. Zn) to the RosettaCM by lanselibai » Tue, 2021-06-22 10:28 |
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2,765 |
by rmoretti Thu, 2021-06-24 12:23 |
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how to cluster loop? by albumns » Wed, 2011-01-05 19:48 |
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6,503 |
by smlewis Mon, 2014-04-21 06:47 |
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optH flag makes hydrogen bond energy scores worse... by tsjain » Fri, 2012-07-13 14:04 |
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6,718 |
by smlewis Mon, 2014-04-21 06:47 |
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selecting pivot_residue in Backrub for ensemble generation by rohi » Fri, 2020-08-07 15:41 |
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4,155 |
by matteoferla Tue, 2020-08-11 10:00 |
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Relax structure using Membrane Environment Scoring Function by anna.duncan » Thu, 2010-02-04 08:01 |
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8,068 |
by jruhym Mon, 2014-04-21 06:47 |
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Native gives higher (positive) than lowest energy and clustered decoys by tiagogomes89 » Thu, 2011-06-02 07:19 |
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5,583 |
by rmoretti Mon, 2014-04-21 06:47 |
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RosettaDock - protonation states by LWilliamson » Tue, 2023-08-15 08:15 |
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1,296 |
by nannemdp Thu, 2023-08-24 08:21 |
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ERROR: compiling rosetta3.1 with MPI by biofisikx » Thu, 2010-08-05 16:00 |
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6,547 |
by smlewis Mon, 2014-04-21 06:47 |
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Using Patches in Rosetta by JS » Wed, 2010-03-10 13:32 |
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8,234 |
by JS Mon, 2014-04-21 06:47 |
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ERROR: beta_nov16(.wts) requested, but -corrections::beta_nov16 not set to true. This leads to a garbage scorefunction. by sia » Mon, 2023-05-08 06:36 |
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1,446 |
by rmoretti Tue, 2023-05-16 07:10 |
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membrane ab initio error after montecarlo by adva » Mon, 2012-12-24 01:43 |
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6,142 |
by tevang Mon, 2014-04-21 06:47 |
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abinitiorelax: No funnel by cno » Tue, 2010-07-27 06:14 |
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5,676 |
by biofisikx Mon, 2014-04-21 06:47 |
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Comparative Modeling databases? by nitroamos » Wed, 2011-11-23 14:54 |
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6,376 |
by rmoretti Thu, 2016-04-28 16:15 |
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RosettaHoles by ge0rgekh0ury » Mon, 2012-01-09 09:01 |
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6,236 |
by Anonymous Mon, 2014-04-21 06:47 |
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How to run Rosetta3 in parallel by lennylv » Mon, 2009-03-30 04:21 |
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9,861 |
by rmoretti Mon, 2014-04-21 06:47 |
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Fixed bb design with hydrogen bond constraint by bharat_46010 » Mon, 2012-04-30 22:56 |
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6,000 |
by smlewis Mon, 2014-04-21 06:47 |
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How to define specific residues in alascan ? by Park » Mon, 2011-06-13 19:56 |
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7,152 |
by smlewis Mon, 2014-04-21 06:47 |
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side-chain refinement by qlj » Wed, 2013-02-20 04:40 |
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8,790 |
by qlj Mon, 2014-04-21 06:47 |
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Error_fragment_generation by Payal Chatterjee » Fri, 2016-02-12 12:11 |
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6,776 |
by G Mustafa Fri, 2021-09-10 01:16 |
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calculated ddG_bind converges to zero by fukamitka » Mon, 2013-06-24 20:32 |
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6,105 |
by fukamitka Mon, 2014-04-21 06:48 |
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Public subversion / Enzyme design public app by weallen » Tue, 2009-08-11 20:50 |
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5,553 |
by weallen Mon, 2014-04-21 06:47 |
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Give preference to native residue during fixed backbone designing by tusharranjanmoharana » Mon, 2016-04-04 12:43 |
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5,748 |
by rmoretti Thu, 2016-04-28 15:19 |
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Memory leak when PDB preparation by Jacky010 » Mon, 2019-05-06 01:28 |
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4,347 |
by Jacky010 Tue, 2019-05-14 01:24 |
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AbinitioRelax under different directories without -constant_seed -jran flag by xpzhang » Wed, 2010-09-15 14:56 |
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7,668 |
by rmoretti Mon, 2014-04-21 06:47 |
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Problem with clustering 1000 centroid pdbs by doranhen » Sat, 2012-04-28 10:34 |
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6,631 |
by doranhen Mon, 2014-04-21 06:47 |
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This element is not expected. by ac.research » Fri, 2017-10-13 03:47 |
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7,463 |
by vmulligan Thu, 2020-07-16 23:31 |
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Fe3p Heme Iron Unrecognized Despite Loading Hem Params by vsjasion » Fri, 2011-09-02 10:37 |
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7,653 |
by tigerous Mon, 2014-04-21 06:47 |
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How do I add hydrogen atoms to my PDB file? by monos_morpheus » Wed, 2011-03-30 03:30 |
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13,793 |
by rmoretti Mon, 2014-04-21 06:47 |
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Can i start again the job ? by byin » Thu, 2011-09-15 01:19 |
6 |
5,474 |
by byin Mon, 2014-04-21 06:47 |
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Cannot run binaries after successful compilation by ac.research » Mon, 2017-08-14 02:56 |
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7,322 |
by ac.research Fri, 2017-08-18 00:57 |
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NR Database Download in install_dependencies.pl (for make_fragments.pl) Broken by Jacob_Verburgt » Tue, 2020-03-10 08:58 |
6 |
5,512 |
by Jacob_Verburgt Wed, 2020-03-11 05:18 |
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modeling loops between domains by dhorita » Thu, 2009-03-05 14:48 |
6 |
5,899 |
by jarod Mon, 2014-04-21 06:47 |
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dG_separated threshold for identifying non-binding peptides with InterfaceAnalyzer. by jyotisutar9 » Thu, 2016-12-01 00:39 |
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6,182 |
by jyotisutar9 Wed, 2016-12-14 09:39 |
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How to handle/retain Metals (Zn, Ca) inside the Protein? by aniyaz » Wed, 2023-01-11 03:21 |
6 |
1,671 |
by rmoretti Mon, 2023-02-20 16:07 |
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distances definition in course-grained (centroid mode) steps by allan.ferrari » Tue, 2017-01-03 05:15 |
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5,404 |
by allan.ferrari Tue, 2017-01-03 11:15 |
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I used mpirun/mpiexec and it runs same job 32times by leygkn » Mon, 2020-09-21 00:53 |
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4,292 |
by jadolfbr Thu, 2020-09-24 10:04 |
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What's a good application to thread a sequence over a peptide (of a peptide-protein complex) and minimize? by brspurri » Tue, 2013-02-12 08:19 |
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7,210 |
by smlewis Mon, 2014-04-21 06:47 |
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The design of a helical peptide by Jacob-kong » Tue, 2012-06-26 06:26 |
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8,242 |
by Jacob-kong Mon, 2014-04-21 06:47 |
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is it possible to ab initio only a part of a protein? by albumns » Sun, 2011-02-13 08:10 |
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5,014 |
by albumns Mon, 2014-04-21 06:47 |
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Atomic refinement with fixed ligand by ahmadkhalifa » Tue, 2018-07-24 10:41 |
6 |
4,814 |
by rmoretti Mon, 2018-08-20 11:45 |
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pdb files in Rosetta format by zhisheng » Mon, 2011-10-31 08:52 |
6 |
7,269 |
by smlewis Mon, 2014-04-21 06:47 |
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Don't want to output the design structure by Lindsay » Wed, 2012-05-02 08:02 |
6 |
5,741 |
by Anonymous Mon, 2014-04-21 06:47 |
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Rosetta CM incorrect threading by ahmadkhalifa » Mon, 2018-08-06 11:09 |
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5,229 |
by rmoretti Fri, 2018-08-24 11:59 |
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No score.sc generated after running flexpepdock. by monos_morpheus » Sun, 2011-04-10 04:06 |
6 |
6,201 |
by robren Mon, 2014-04-21 06:47 |
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Problem With Rosetta3.3 Comparative/Loop Modeling And Constraints by jurkm » Mon, 2011-09-12 01:01 |
6 |
6,260 |
by jurkm Mon, 2014-04-21 06:47 |
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Rosetta CM - Ignore Sporadic Errors by Swillard » Wed, 2018-06-13 05:47 |
6 |
4,676 |
by rmoretti Mon, 2018-11-12 14:29 |
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