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Typical relax options not applied in relax.mpi.linuxiccrelease?? by David Weis » Mon, 2017-02-27 11:35 |
5 |
4,850 |
by rmoretti Thu, 2017-08-03 09:01 |
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type of docking by rohi » Mon, 2020-07-06 06:55 |
11 |
8,082 |
by rohi Sun, 2020-07-26 17:03 |
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two questions about "Prepare structures for use in Rosetta" by Anonymous » Wed, 2012-06-06 08:13 |
6 |
6,061 |
by Anonymous Mon, 2014-04-21 06:47 |
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trying to create heme.params by einew » Mon, 2011-02-28 13:33 |
3 |
4,453 |
by einew Mon, 2014-04-21 06:47 |
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Truncating a protein using rosetta by Wexter300 » Mon, 2023-02-13 12:05 |
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714 |
by Wexter300 Mon, 2023-02-13 13:04 |
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Troubles using RigidBodyTransMover and RigidBodyPerturbMover by alejandro » Thu, 2011-04-21 06:11 |
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3,709 |
by alejandro Mon, 2014-04-21 06:47 |
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total_score changes when decomposing bb hbonds ref2015 by Liviu Copoiu » Mon, 2022-10-31 15:40 |
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879 |
by Liviu Copoiu Mon, 2022-10-31 16:03 |
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total score by score » Mon, 2010-05-03 02:03 |
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2,363 |
by smlewis Mon, 2014-04-21 06:47 |
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Total Rama Score by jcminerlanl » Thu, 2018-05-10 07:19 |
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2,137 |
by rmoretti Thu, 2018-06-28 14:28 |
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total energy score of the pdb structure by Lindsay » Tue, 2012-05-01 12:14 |
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6,426 |
by Lindsay Mon, 2014-04-21 06:47 |
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To smlewis............parallel job submission by anusmita_sahoo » Mon, 2010-04-19 22:28 |
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1,564 |
by anusmita_sahoo Mon, 2014-04-21 06:47 |
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This element is not expected. by ac.research » Fri, 2017-10-13 03:47 |
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7,463 |
by vmulligan Thu, 2020-07-16 23:31 |
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There is a problem executing “rosetta_scripts.static.linuxgccrelease ” by zjya » Tue, 2021-02-02 23:44 |
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1,676 |
by rmoretti Wed, 2021-02-03 14:45 |
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The vall.jul19.2011.gz Database by ac.research » Fri, 2017-09-01 02:29 |
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4,583 |
by ac.research Mon, 2017-09-04 16:43 |
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The question about protonation of Rosetta by asbelx » Tue, 2017-12-19 05:44 |
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4,468 |
by rmoretti Mon, 2018-01-15 15:34 |
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The question about FavorNativeResidue by asbelx » Fri, 2019-04-12 20:02 |
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1,744 |
by rmoretti Tue, 2019-07-09 15:57 |
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the question about ddg of disulfide bond mutants by asbelx » Sun, 2021-08-29 06:40 |
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1,153 |
by asbelx Wed, 2021-09-08 23:19 |
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the problem in making fragments by croshong » Thu, 2009-12-03 17:15 |
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2,577 |
by smlewis Mon, 2014-04-21 06:47 |
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the output of ligand docking by phanvy » Fri, 2015-07-03 01:27 |
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2,098 |
by rmoretti Fri, 2015-07-03 13:14 |
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the meaning of "maxsub" in score.fsc by exchhattu » Tue, 2009-11-10 04:37 |
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3,587 |
by smlewis Mon, 2014-04-21 06:47 |
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The hbond for REF2015 by asbelx » Mon, 2022-06-06 06:07 |
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1,137 |
by asbelx Mon, 2022-06-06 23:15 |
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The following options have been set but have not yet been used by jrcf » Fri, 2015-10-09 10:48 |
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3,858 |
by jrcf Fri, 2015-10-16 10:57 |
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The design of a helical peptide by Jacob-kong » Tue, 2012-06-26 06:26 |
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8,243 |
by Jacob-kong Mon, 2014-04-21 06:47 |
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The concept of unsatisfied hydrogen bond by asbelx » Wed, 2018-04-25 01:32 |
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3,258 |
by asbelx Thu, 2018-04-26 00:23 |
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The algorithm of adding missing Hydrogen to a backbone by ac.research » Tue, 2018-03-06 03:48 |
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2,332 |
by rmoretti Sat, 2018-03-17 10:43 |
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The -symmetry:perturb_rigid_body_dofs flag by doranhen » Sat, 2012-04-28 13:01 |
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2,843 |
by doranhen Mon, 2014-04-21 06:47 |
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TEST - who got this email? by smlewis » Mon, 2016-05-23 17:24 |
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1,829 |
by rmoretti Tue, 2016-07-12 08:48 |
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Temperature by mrosam » Mon, 2022-08-08 01:37 |
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498 |
by mrosam Mon, 2022-08-08 01:37 |
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TaskOperations with AntibodyDesignMover by chenna » Sun, 2023-04-23 23:52 |
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357 |
by chenna Sun, 2023-04-23 23:52 |
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talaris2013 energy terms modifications by peony » Sat, 2013-11-23 02:48 |
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16,900 |
by rmoretti Mon, 2014-04-21 06:48 |
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Talaris scoring function by Lindsay » Sun, 2014-08-24 18:16 |
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6,394 |
by AndrewLeaver-Fay Sun, 2015-09-20 19:34 |
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Talaris score function by nawsad » Tue, 2013-05-21 03:32 |
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8,892 |
by rmoretti Mon, 2014-04-21 06:47 |
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Symmetric Processing for evaluating side-chain of chi angle by qlj » Wed, 2012-10-10 04:08 |
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3,001 |
by smlewis Mon, 2014-04-21 06:47 |
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Symmetric local protein docking by efratmas » Tue, 2011-01-11 03:00 |
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4,400 |
by smlewis Mon, 2014-04-21 06:47 |
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symmetric Docking- TRIMER in Rosetta 3.4 ? by sdg_lab » Thu, 2012-04-12 04:22 |
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3,579 |
by rmoretti Mon, 2014-04-21 06:47 |
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symmetric docking application rosetta3.2: the docking_local_refine flag by doranhen » Sun, 2012-05-06 02:20 |
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3,203 |
by doranhen Mon, 2014-04-21 06:47 |
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Symmetric docking - tetramer of trimers by SenyorDrew » Fri, 2011-04-29 08:26 |
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2,943 |
by IAndre Mon, 2014-04-21 06:47 |
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Symmetric Docking (Making Trimer from Monomerics Units) by sdg_lab » Thu, 2012-04-12 09:21 |
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2,251 |
by rmoretti Mon, 2014-04-21 06:47 |
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symmetric design without symmetrizing the structure by sdh_h » Tue, 2016-09-13 05:49 |
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2,058 |
by rmoretti Tue, 2016-09-13 07:41 |
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Symmetric abrelax modeling by SenyorDrew » Fri, 2011-02-18 10:14 |
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4,496 |
by IAndre Mon, 2014-04-21 06:47 |
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Suppressing Rosetta output, flag for that? by msellers » Tue, 2011-04-26 11:18 |
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5,184 |
by smlewis Mon, 2014-04-21 06:47 |
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Suppress printing to STDOUT for applications by tylerborrman » Tue, 2015-11-24 11:37 |
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5,648 |
by code_Monkey Thu, 2021-03-18 08:03 |
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Suggestions for email notification & "category" for post by lanselibai » Sun, 2014-11-16 10:44 |
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1,543 |
by lanselibai Sun, 2014-11-16 10:44 |
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Successful installation on OpenSuse11.1 - tests? by zharmad » Thu, 2010-08-19 00:30 |
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3,896 |
by zharmad Mon, 2014-04-21 06:47 |
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Submitting job to local cluster by tusharranjanmoharana » Fri, 2016-04-15 01:38 |
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10,037 |
by rmoretti Mon, 2016-05-09 09:23 |
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Submit job in parallel : MPI and jd2 ? by anusmita_sahoo » Wed, 2010-03-31 00:18 |
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19,009 |
by jadolfbr Wed, 2014-05-14 08:51 |
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Structure-sequence alignment generation with selected PDB how? by nzsuzsanna » Tue, 2016-05-10 07:39 |
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1,369 |
by nzsuzsanna Tue, 2016-05-10 07:39 |
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Structure refinement with RDC constraint by shushunur » Thu, 2018-01-18 00:44 |
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2,250 |
by rmoretti Tue, 2018-01-30 09:08 |
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Structure refinement guided by Cryo-EM density maps by ahmadkhalifa » Thu, 2018-03-08 08:22 |
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6,812 |
by ahmadkhalifa Tue, 2018-05-01 09:04 |
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Structure refinement for helical assembles using Rosetta by xiaoyanzi » Thu, 2020-06-18 00:34 |
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963 |
by xiaoyanzi Thu, 2020-06-18 00:36 |
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Structure Prediction: Max Sequence Length? by jcsaborio » Tue, 2009-07-14 12:10 |
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4,058 |
by jcsaborio Mon, 2014-04-21 06:47 |
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Structure Prediction of protein mutant using relax by Delfosse57 » Tue, 2023-01-10 13:26 |
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654 |
by JW_24 Tue, 2023-01-24 04:55 |
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Structure prediction based on template -> Documentation comparative modeling of protein structures by maxebert » Sun, 2011-03-20 01:15 |
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3,193 |
by rmoretti Mon, 2014-04-21 06:47 |
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Structural Similarity by Soler » Mon, 2021-11-29 22:02 |
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1,072 |
by rmoretti Tue, 2021-11-30 07:41 |
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str::out_of_range with mpiexec and relax by pedro.guillem » Fri, 2020-06-19 10:39 |
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1,839 |
by pedro.guillem Wed, 2020-06-24 04:49 |
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Steps to use D-amino acids by tevang » Mon, 2012-09-10 15:42 |
15 |
16,542 |
by tevang Mon, 2014-04-21 06:47 |
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start pose and native pose don't match in lengh by zhisheng » Thu, 2011-12-15 10:23 |
1 |
2,434 |
by smlewis Mon, 2014-04-21 06:47 |
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ssDNA (aptamer)/protein docking by JulienO » Fri, 2016-05-27 02:25 |
1 |
2,365 |
by rmoretti Tue, 2016-07-12 08:47 |
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spline constraint by jadolfbr » Mon, 2012-06-25 04:43 |
3 |
4,004 |
by smlewis Mon, 2014-04-21 06:47 |
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Speeding up FastDesign by ebetica0 » Wed, 2021-04-28 13:08 |
1 |
1,519 |
by vmulligan Wed, 2021-04-28 14:20 |
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Speeding up docking to a large complex by skovacs » Thu, 2012-05-10 20:50 |
30 |
28,061 |
by smlewis Mon, 2014-04-21 06:47 |
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Specifying sidechain NOE restraints in Relax! by kalabharath » Mon, 2012-12-10 16:44 |
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3,084 |
by kalabharath Mon, 2014-04-21 06:47 |
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span and frags filefor multichain transmembrane protein by zhiguang » Wed, 2016-10-26 13:28 |
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4,060 |
by zhiguang Tue, 2016-11-15 12:27 |
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Some problems with the "advanced protein-protein docking" tutorial by Sunyp_IM » Tue, 2017-06-27 09:33 |
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1,934 |
by smlewis Wed, 2017-06-28 06:59 |
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Solving van der waals clashes in a transmembrane protein model with rosetta by doranhen » Wed, 2012-12-05 00:12 |
3 |
3,818 |
by smlewis Mon, 2014-04-21 06:47 |
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solvation by gw » Wed, 2011-08-31 17:14 |
4 |
4,652 |
by smlewis Mon, 2014-04-21 06:47 |
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solution of the length of peptide candidates is larger than substrate with FlexPepDock and Flexpepbind by ziqi1234 » Thu, 2018-05-24 02:18 |
0 |
1,265 |
by ziqi1234 Thu, 2018-05-24 02:18 |
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SnugDock or RosettaDock for HDX-MS data by hanzhiz » Thu, 2021-12-16 09:18 |
0 |
672 |
by hanzhiz Thu, 2021-12-16 09:18 |
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SnugDock equivalent in newer Rosetta code by SenyorDrew » Tue, 2016-03-29 09:16 |
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2,775 |
by SenyorDrew Wed, 2016-04-06 10:52 |
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snugdock and rosetta 3.2?? by sudhar » Thu, 2011-02-24 00:36 |
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2,282 |
by smlewis Mon, 2014-04-21 06:47 |
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Snugdock and antibody modelling by sudhar » Thu, 2010-06-10 08:13 |
1 |
2,541 |
by smlewis Mon, 2014-04-21 06:47 |
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SNUGDOCK by adva » Sun, 2017-07-16 00:49 |
1 |
1,662 |
by jeliazkov Tue, 2017-07-18 09:51 |
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smoothly kill a mpirun process by fred » Tue, 2014-02-18 06:06 |
2 |
5,341 |
by Ashafix Wed, 2014-02-19 06:53 |
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small molecule charge generated by molfile_to_params.py by rohi » Wed, 2021-03-17 09:35 |
3 |
1,961 |
by rmoretti Wed, 2021-03-17 13:52 |
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Site-wide installations and 64-bit builds by bene » Tue, 2009-10-20 10:16 |
1 |
2,095 |
by smlewis Mon, 2014-04-21 06:47 |
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simple_cycpep_predict issue modifying terminal residue by JEaston » Thu, 2020-06-25 13:15 |
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1,377 |
by vmulligan Mon, 2020-06-29 13:09 |
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Simple FoldTree Question by gipsonb » Wed, 2012-04-25 18:19 |
3 |
3,812 |
by gipsonb Mon, 2014-04-21 06:47 |
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Silent Files by ctaylor » Tue, 2009-12-22 09:22 |
3 |
3,537 |
by smlewis Mon, 2014-04-21 06:47 |
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sign of ddG of mutation by Lindsay » Wed, 2013-11-27 00:25 |
2 |
4,720 |
by Lindsay Mon, 2014-04-21 06:48 |
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side-chain refinement by qlj » Wed, 2013-02-20 04:40 |
6 |
8,790 |
by qlj Mon, 2014-04-21 06:47 |
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Side-chain packing with multiple chains by pachecoj » Mon, 2014-04-21 16:53 |
3 |
4,538 |
by jadolfbr Mon, 2014-04-21 21:05 |
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Side-chain grafting in fixed scaffold by Kazu » Wed, 2020-05-20 08:45 |
0 |
1,010 |
by Kazu Wed, 2020-05-20 11:58 |
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Show I be using beta_nov16 scorefxn? by matteoferla » Thu, 2021-04-01 04:06 |
0 |
1,215 |
by matteoferla Thu, 2021-04-01 04:06 |
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should rosetta3.1 do prepacking before docking? by lqzhang » Thu, 2010-01-07 12:15 |
3 |
3,500 |
by smlewis Mon, 2014-04-21 06:47 |
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Should all input structures to energy_based_clustering have an output pdb file? by Brian Wiley » Mon, 2023-01-30 20:42 |
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772 |
by Brian Wiley Tue, 2023-01-31 19:08 |
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short peptide fragment file generation by cheyuk » Mon, 2016-07-11 00:04 |
4 |
4,715 |
by smlewis Wed, 2016-07-13 23:41 |
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shockingly low fragment diversity ___nnmake failed by anusmita_sahoo » Wed, 2010-03-10 21:15 |
0 |
1,519 |
by anusmita_sahoo Mon, 2014-04-21 06:47 |
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ShapeSimilarity, ElectrostaticSimilarity (RosettaSurf) by Ken » Mon, 2022-05-23 07:16 |
1 |
779 |
by ajasja Mon, 2022-05-23 07:19 |
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setup_run error with multiple resonance lists by aep » Fri, 2016-03-18 13:36 |
1 |
2,148 |
by rmoretti Thu, 2016-04-28 15:49 |
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setting timeout option in MPI run by syntekabio2019 » Mon, 2024-02-26 01:09 |
5 |
386 |
by rmoretti Wed, 2024-02-28 09:20 |
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Setting output values using a database (with relax app) by pedro.guillem » Thu, 2020-05-14 04:33 |
1 |
1,407 |
by pedro.guillem Wed, 2020-06-24 04:41 |
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sequence_tolerance optimize the binding to chemical compounds by coomteng@gmail.com » Tue, 2015-05-05 07:32 |
3 |
3,468 |
by rmoretti Mon, 2015-05-25 11:00 |
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sequence_tolerance is very slow when -ms:num_packs > 1 by coomteng@gmail.com » Thu, 2016-08-25 13:17 |
3 |
3,356 |
by coomteng@gmail.com Fri, 2016-08-26 00:01 |
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Sequence symmetry during FastDesign for repeat protein design by cttm4a1 » Tue, 2022-09-06 21:02 |
1 |
720 |
by rmoretti Wed, 2022-09-07 09:19 |
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Sequence Profile/Checkpoint file by ojmel » Fri, 2021-04-02 17:29 |
1 |
1,278 |
by taylorjones Mon, 2021-04-05 13:17 |
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Selecting Top Scoring Decoys by kalabharath » Thu, 2011-10-20 22:08 |
2 |
2,907 |
by rmoretti Mon, 2014-04-21 06:47 |
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selecting pivot_residue in Backrub for ensemble generation by rohi » Fri, 2020-08-07 15:41 |
6 |
4,155 |
by matteoferla Tue, 2020-08-11 10:00 |
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Segmentation fault with nstruct > 1 by Brian Wiley » Sun, 2023-02-12 20:46 |
0 |
430 |
by Brian Wiley Sun, 2023-02-12 20:46 |
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segmentation fault when using design_hpatch scoring function by rbjacob » Mon, 2018-04-09 11:05 |
5 |
3,947 |
by smlewis Wed, 2018-04-11 11:45 |
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Segmentation fault on antibody structure prediction by dkesar » Fri, 2021-06-04 19:09 |
0 |
784 |
by dkesar Fri, 2021-06-04 19:09 |
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