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Error runining PyRosetta "undefined symbol: __sinh_finite"

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Error runining PyRosetta "undefined symbol: __sinh_finite"

Hi all!
*OS*: Mint Linux 17,
64bit Linux (3.13.0-24-generic #46-Ubuntu SMP Thu Apr 10 19:11:08 UTC 2014 x86_64 x86_64 x86_64 GNU/Linux
*Python*: Python 2.7.7 |Continuum Analytics, Inc.| (default, Jun 2 2014, 12:34:02) [GCC 4.1.2 20080704 (Red Hat 4.1.2-54)] on linux2
*PyRosseta*: PyRosetta.Ubuntu-12.04LTS.64Bit.devel-r56795

While trying to import PyRosseta I get the following error:
"ImportError: rosetta/ undefined symbol: __sinh_finite"

Here are the full steps: Inside of a bash shell I do:
import rosetta

Here is the stack trace:
Traceback (most recent call last): File "", line 1, in File "rosetta/",
line 30, in import utility File "rosetta/utility/",
line 1, in from _utility_ import *
ImportError: rosetta/ undefined symbol: __sinh_finite

Any help is very welcome.
Thank you,
Ajasja Ljubetič

Post Situation: 
Wed, 2014-06-18 08:09

This seems to be connected to Anaconda python.
If I use the system python (
Python 2.7.6 (default, Mar 22 2014, 22:59:56)
[GCC 4.8.2] on linux2)
Then I get a different error:
File "rosetta/", line 45, in <module>
import numeric
ImportError: No module named numeric

And indeed the whole numeric subdirectory is missing under the rosetta module. Will try to re-download the tar.bz2 file.

Wed, 2014-06-18 09:00


I am having this missing numeric module when I tried to install on Ubuntu. What fixed this problem for you?

Did you use a different file than the regular tar.bz2 file?

Thanks for your help

Thu, 2014-06-26 11:54


Yes, I downloaded a different release. (What each release means is described here).

Best regards,

Mon, 2014-06-30 13:33

Happy to report the PyRosetta.Ubuntu-12.04LTS.64Bit.namespace.mode=release.branch=release-r21 works correctly with the system python version!

I did notice that the database directory is no longer named "rosetta_database", but just "database".
In "" the line for the database is:
export PYROSETTA_DATABASE=$PYROSETTA/rosetta_database
(so the wrong name, but somehow the correct database directory is found nevertheless).

Wed, 2014-06-18 09:36